ameriflux/22.plot.ncl
author Forrest Hoffman <forrest@climatemodeling.org>
Thu, 26 Mar 2009 14:02:21 -0400
changeset 1 4be95183fbcd
permissions -rw-r--r--
Modifications to scoring and graphics production for the final version of code for the C-LAMP paper in GCB.
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;************************************************************
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; merge annual
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; add table
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; add time series plot
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; sort by latitude in decending order (N->S)
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; find year_ob >= 4
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; add year_ob_i and year_ob_f
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; change long_name
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;************************************************************
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load "$NCARG_ROOT/lib/ncarg/nclscripts/csm/gsn_code.ncl"
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load "$NCARG_ROOT/lib/ncarg/nclscripts/csm/gsn_csm.ncl"
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load "$NCARG_ROOT/lib/ncarg/nclscripts/csm/contributed.ncl"
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;************************************************************
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procedure set_line(lines:string,nline:integer,newlines:string) 
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begin
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; add line to ascci/html file
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  nnewlines = dimsizes(newlines)
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  if(nline+nnewlines-1.ge.dimsizes(lines))
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    print("set_line: bad index, not setting anything.") 
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    return
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  end if 
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  lines(nline:nline+nnewlines-1) = newlines
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;  print ("lines = " + lines(nline:nline+nnewlines-1))
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  nline = nline + nnewlines
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  return 
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end
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;*************************************************************
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begin
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  plot_type     = "ps"
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  plot_type_new = "png"
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;************************************************
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; model data info
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;************************************************
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  model = "cn"
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; model = "casa"
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  model_name = "i01.10" + model
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  ENERGY ="new"
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  nmonth = 12
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;************************************************
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; observed data info
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;************************************************
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 station = (/"ARM_Oklahoma" \
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            ,"ARM_Oklahoma_burn" \
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            ,"ARM_Oklahoma_control" \
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            ,"Atqasuk" \
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            ,"Audubon" \
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            ,"AustinCary" \
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            ,"Bartlett" \
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            ,"Bondville" \
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            ,"Brookings" \
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            ,"Donaldson" \
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            ,"Duke_Forest_Hardwoods" \
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            ,"Duke_Forest_Open_Field" \
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            ,"Duke_Forest_Pine" \
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            ,"Fermi_Ag" \
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            ,"Fermi_Prairie" \
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            ,"Flagstaff_Managed" \
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            ,"Flagstaff_Unmanaged" \
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            ,"Flagstaff_Wildfire" \
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            ,"FortPeck" \
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            ,"FreemanRanch_mesquite" \
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            ,"Goodwin_Creek" \
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            ,"HarvardForest" \
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            ,"HarvardForestHemlock" \
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            ,"HowlandForestMain" \
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            ,"HowlandForestWest" \
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            ,"Ivotuk" \
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            ,"KendallGrasslands" \
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            ,"KennedySpaceCenterPine" \
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            ,"KennedySpaceCenterScrub" \
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            ,"LittleProspect" \
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            ,"LostCreek" \
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            ,"Mead-irrigated" \
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            ,"Mead-irrigated-rotation" \
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            ,"Mead-rainfed" \
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            ,"Metolius_2nd_YoungPonderosaPine" \
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            ,"MetoliusEyerly" \
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            ,"MetoliusIntermediatePine" \
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            ,"MetoliusOldPonderosaPine" \
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            ,"MissouriOzark" \
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            ,"Mize" \
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            ,"MorganMonroe" \
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            ,"NiwotRidge" \
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            ,"NorthCarolina_cc" \
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            ,"NorthCarolina_lp" \
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            ,"ParkFalls" \
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            ,"Rayonier" \
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            ,"SantaRita" \
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            ,"SkyOaks_Old" \
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            ,"SkyOaks_PostFire" \
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            ,"SkyOaks_Young" \
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            ,"SylvaniaWilderness" \
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            ,"Toledo" \
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            ,"Tonzi" \
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            ,"UCI_1850" \
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            ,"UCI_1930" \
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            ,"UCI_1964" \
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            ,"UCI_1964wet" \
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            ,"UCI_1981" \
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            ,"UCI_1989" \
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            ,"UCI_1998" \
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            ,"UMBS" \
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            ,"Vaira" \
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            ,"WalkerBranch" \
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            ,"WillowCreek" \
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            ,"WindRiver" \
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            ,"Wisconsin_ihw" \
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            ,"Wisconsin_irp" \
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            ,"Wisconsin_mrp" \
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            ,"Wisconsin_myjp" \
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            ,"Wisconsin_pb" \
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            ,"Wisconsin_rpcc" \
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            ,"Wisconsin_yhw" \
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            ,"Wisconsin_yjp" \
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            ,"Wisconsin_yrp" \
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            /)
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 year_ob = (/"2003-2006" \
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            ,"2005-2006" \
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            ,"2005-2006" \
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            ,"1999-2006" \
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            ,"2002-2006" \
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            ,"2000-2005" \
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            ,"2004-2005" \
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            ,"1996-2006" \
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            ,"2004-2006" \
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            ,"1999-2004" \
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            ,"2003-2005" \
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            ,"2001-2005" \
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            ,"2001-2005" \
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            ,"2005-2006" \
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            ,"2004-2006" \
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            ,"2005-2006" \
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            ,"2005-2006" \
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            ,"2005-2006" \
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            ,"2000-2006" \
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            ,"2004-2006" \
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            ,"2002-2006" \
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            ,"1991-2004" \
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            ,"2004-2004" \
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            ,"1996-2004" \
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            ,"1999-2004" \
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            ,"2003-2006" \
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            ,"2004-2006" \
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            ,"2002-2002" \
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            ,"2000-2006" \
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            ,"2002-2005" \
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            ,"2001-2005" \
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            ,"2001-2005" \
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            ,"2001-2005" \
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            ,"2001-2005" \
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            ,"2004-2005" \
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            ,"2004-2005" \
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            ,"2003-2005" \
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            ,"1996-2000" \
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            ,"2004-2006" \
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            ,"1998-2004" \
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            ,"1999-2005" \
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            ,"1999-2003" \
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            ,"2005-2006" \
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            ,"2005-2006" \
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            ,"1996-2003" \
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            ,"1998-1998" \
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            ,"2004-2006" \
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            ,"1997-2006" \
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            ,"2004-2006" \
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            ,"1997-2006" \
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            ,"2002-2006" \
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            ,"2004-2005" \
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            ,"2001-2006" \
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            ,"2004-2005" \
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            ,"2001-2005" \
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            ,"2001-2005" \
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            ,"2002-2004" \
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            ,"2001-2005" \
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            ,"2001-2005" \
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            ,"2002-2005" \
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            ,"1999-2003" \
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            ,"2001-2006" \
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            ,"1995-1999" \
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            ,"1999-2005" \
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            ,"1999-2004" \
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            ,"2003-2003" \
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            ,"2003-2003" \
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            ,"2002-2005" \
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            ,"2004-2004" \
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            ,"2002-2002" \
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            ,"2005-2005" \
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            ,"2002-2002" \
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            ,"2004-2005" \
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            ,"2002-2002" \
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            /)
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 field   = (/"NEE Flux" \
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            ,"Net Radiation" \
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            ,"Latent Heat" \
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            ,"Sensible Heat" \
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            ,"GPP Flux" \
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            ,"Respiration" \
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            /)
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 field_unit = (/"u mol/m2/s" \
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               ,"W/m2" \
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               ,"W/m2" \
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               ,"W/m2" \
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               ,"u mol/m2/s" \
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               ,"u mol/m2/s" \
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               /)
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 nstation = dimsizes(station)
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 nfield   = dimsizes(field)
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;========================================================================
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; get observed info: number of year, first/last year, lat, lon
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; and annual data
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 dir_root = "/fis/cgd/cseg/people/jeff/clamp/ameriflux/data/"
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 year_station = new ((/nstation/),integer) ; number of year
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 year_ob_i    = new ((/nstation/),integer) ; first year
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 year_ob_f    = new ((/nstation/),integer) ; last year
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 lat_ob       = new ((/nstation/),float)   ; latitude
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 lon_ob       = new ((/nstation/),float)   ; longitude 
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 data_ob_ann  = new ((/nfield, nmonth, nstation/),float)
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 do n = 0, nstation-1
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    diro = dir_root + station(n)+"/"
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    filo = year_ob(n)+"_L4_m.nc"
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    fo   = addfile (diro+filo,"r")
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    lat_ob(n) = fo->lat
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    lon_ob(n) = fo->lon
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    year      = fo->year
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    year_station(n) = dimsizes(year)
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    year_ob_i(n)    = year(0)
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    year_ob_f(n)    = year(year_station(n)-1)
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    delete (year)
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    data = fo->NEE_or_fMDS
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    data_ob_ann(0,:,n) = dim_avg(data(month|:,year|:))
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    data = fo->Rg_f
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    data_ob_ann(1,:,n) = dim_avg(data(month|:,year|:))
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    data = fo->LE_f
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    data_ob_ann(2,:,n) = dim_avg(data(month|:,year|:))
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    data = fo->H_f
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    data_ob_ann(3,:,n) = dim_avg(data(month|:,year|:))
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    data = fo->GPP_or_MDS
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    data_ob_ann(4,:,n) = dim_avg(data(month|:,year|:))
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    data = fo->Reco_or
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    data_ob_ann(5,:,n) = dim_avg(data(month|:,year|:))
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    delete (data) 
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    delete (fo)   
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 end do
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;print (year_ob_i)
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;print (year_ob_f)
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;--------------------------------------------------------------
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; find (# of year observed) >=4 and year_ob_i <= 2001
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 i_long_ob = ind(year_station .ge. 4 .and. year_ob_i .le. 2001)
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 station_long      = station(i_long_ob)
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 lat_ob_long       = lat_ob(i_long_ob)
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 lon_ob_long       = lat_ob(i_long_ob)
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 year_ob_long      = year_ob(i_long_ob)
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 year_ob_i_long    = year_ob_i(i_long_ob)
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 year_ob_f_long    = year_ob_f(i_long_ob)
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 year_station_long = year_station(i_long_ob)
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 nstation_long     = dimsizes(station_long)
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; print (i_long_ob)
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; print (nstation_long)
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; print (station_long)
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; print (year_ob_i(i_long_ob))
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;=========================================================
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;   get model data at observed lat-lon
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    dirm = "/fis/cgd/cseg/people/jeff/clamp_data/model/"    
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    film = model_name+"_ameriflux_1990-2004_monthly.nc"
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    fm   = addfile (dirm+film,"r")
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    xm   = fm->lon
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    ym   = fm->lat 
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    date = fm->date
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    date_dim = dimsizes(date)
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    nyear  = date_dim(0)
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    data_mod      = new ((/nfield,nyear,nmonth,nstation/),float)
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    data_mod_ann  = new ((/nfield,nmonth,nstation/),float)
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    data_mod_long = new ((/nfield,nyear,nmonth,nstation_long/),float)
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;   change to unit of observed (u mol/m2/s)
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;   Model_units [=] gC/m2/s
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;   12. = molecular weight of C
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;   u mol = 1e-6 mol
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    factor = 1.e6 /12.
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;------------------------------------------------------------
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;   interpolate model data into observed station
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;   note: model is 0-360E, 90S-90N
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;   to be able to handle observation at (-89.98,-24.80)
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    ym(0) = -90.
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;------------------------------------------------------------  
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if (ENERGY .eq. "old") then
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  data = fm->NEE
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  data_mod(0,:,:,:) = data(:,:,:) * factor
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; data  = fm->LATENT
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  data1 = fm->FCEV
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  data2 = fm->FCTR
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  data3 = fm->FGEV
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  data_mod(2,:,:,:) = data1(:,:,:)+data2(:,:,:)+data3(:,:,:) 
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  delete (data1)
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  delete (data2)
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  delete (data3)
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; data = fm->SENSIBLE
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  data  = fm->FSH
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  data_mod(3,:,:,:) = data(:,:,:) 
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; data  = fm->NETRAD
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  data1 = fm->FSA
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  data2 = fm->FIRA
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  data_mod(1,:,:,:) = data1(:,:,:)-data2(:,:,:) 
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  delete (data1)
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  delete (data2)
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else
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  data = fm->NEE
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  yy = linint2_points_Wrap(xm,ym,data,True,lon_ob,lat_ob,0)
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  data_mod_ann(0,:,:)= dim_avg(yy(month|:,pts|:,year|:)) * factor
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  data_mod(0,:,:,:) = yy(:,:,:) * factor
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; printVarSummary(yy)
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  data = fm->NETRAD
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  yy = linint2_points_Wrap(xm,ym,data,True,lon_ob,lat_ob,0)
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  data_mod_ann(1,:,:)= dim_avg(yy(month|:,pts|:,year|:)) 
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  data_mod(1,:,:,:) = yy(:,:,:) 
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  data = fm->LATENT
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  yy = linint2_points_Wrap(xm,ym,data,True,lon_ob,lat_ob,0)
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  data_mod_ann(2,:,:)= dim_avg(yy(month|:,pts|:,year|:)) 
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  data_mod(2,:,:,:) = yy(:,:,:) 
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; data = fm->SENSIBLE
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  data = fm->FSH
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  yy = linint2_points_Wrap(xm,ym,data,True,lon_ob,lat_ob,0)
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  data_mod_ann(3,:,:)= dim_avg(yy(month|:,pts|:,year|:)) 
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  data_mod(3,:,:,:) = yy(:,:,:) 
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end if
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  data = fm->GPP
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  yy = linint2_points_Wrap(xm,ym,data,True,lon_ob,lat_ob,0)
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  data_mod_ann(4,:,:)= dim_avg(yy(month|:,pts|:,year|:)) * factor
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  data_mod(4,:,:,:) = yy(:,:,:) * factor 
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  if (model .eq. "cn") then
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     data = fm->ER
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  else
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     data1 = fm->AR
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     data2 = fm->HR
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   392
     data  = data1 + data2
forrest@0
   393
    
forrest@0
   394
     delete (data1)
forrest@0
   395
     delete (data2)
forrest@0
   396
  end if
forrest@0
   397
forrest@0
   398
  yy = linint2_points_Wrap(xm,ym,data,True,lon_ob,lat_ob,0)
forrest@0
   399
  data_mod_ann(5,:,:)= dim_avg(yy(month|:,pts|:,year|:)) * factor
forrest@0
   400
  data_mod(5,:,:,:) = yy(:,:,:) * factor
forrest@0
   401
forrest@0
   402
  data_mod_long(:,:,:,:) = data_mod(:,:,:,i_long_ob)
forrest@0
   403
forrest@0
   404
  delete (data_mod)
forrest@0
   405
  delete (fm) 
forrest@0
   406
  delete (data)
forrest@0
   407
  delete (yy)
forrest@0
   408
forrest@0
   409
;*******************************************************************
forrest@0
   410
; for station line plot
forrest@0
   411
;*******************************************************************
forrest@0
   412
forrest@0
   413
; for x-axis in xyplot
forrest@0
   414
  mon = ispan(1,12,1)
forrest@0
   415
  mon@long_name = "month"
forrest@0
   416
forrest@0
   417
  res                   = True               ; plot mods desired
forrest@0
   418
  res@xyLineThicknesses = (/2.0,2.0/)        ; make 2nd lines thicker
forrest@0
   419
  res@xyLineColors      = (/"blue","red"/)   ; line color (ob,model)
forrest@0
   420
forrest@0
   421
  res@tmXBFormat  = "f"                      ; not to add trailing zeros
forrest@0
   422
forrest@0
   423
;-------------------------------------------------------------------------
forrest@0
   424
; Add a boxed legend using the more simple method
forrest@0
   425
forrest@0
   426
  res@pmLegendDisplayMode    = "Always"
forrest@0
   427
; res@pmLegendWidthF         = 0.1
forrest@0
   428
  res@pmLegendWidthF         = 0.08
forrest@0
   429
  res@pmLegendHeightF        = 0.06
forrest@0
   430
; res@pmLegendOrthogonalPosF = -1.17
forrest@0
   431
; res@pmLegendOrthogonalPosF = -1.00  ;(downward)
forrest@0
   432
  res@pmLegendOrthogonalPosF = -0.30  ;(downward)
forrest@0
   433
forrest@0
   434
; res@pmLegendParallelPosF   =  0.18
forrest@0
   435
  res@pmLegendParallelPosF   =  0.23  ;(rightward)
forrest@0
   436
forrest@0
   437
; res@lgPerimOn             = False
forrest@0
   438
  res@lgLabelFontHeightF     = 0.015
forrest@0
   439
  res@xyExplicitLegendLabels = (/"observed",model_name/)
forrest@0
   440
;-------------------------------------------------------------------
forrest@0
   441
; for panel plot
forrest@0
   442
  res@gsnFrame     = False                   ; Do not draw plot 
forrest@0
   443
  res@gsnDraw      = False                   ; Do not advance frame
forrest@0
   444
forrest@0
   445
  pres                            = True     ; panel plot mods desired
forrest@0
   446
  pres@gsnPanelYWhiteSpacePercent = 5        ; increase white space around
forrest@0
   447
                                             ; indiv. plots in panel
forrest@0
   448
  pres@gsnMaximize                = True     ; fill the page
forrest@0
   449
;-------------------------------------------------------------------
forrest@0
   450
forrest@0
   451
;==============================================================
forrest@0
   452
; get ob data at each site with long observation
forrest@0
   453
forrest@0
   454
  dir_root = "/fis/cgd/cseg/people/jeff/clamp/ameriflux/data/"
forrest@0
   455
forrest@0
   456
  do n = 0,nstation_long-1
forrest@0
   457
; do n = 0,0
forrest@0
   458
forrest@0
   459
    year_setback = 0
forrest@0
   460
forrest@0
   461
    nyear = year_station_long(n)
forrest@0
   462
forrest@0
   463
    if (year_ob_f_long(n).eq. 2006) then
forrest@0
   464
       year_setback = 2006 -2004
forrest@0
   465
    end if
forrest@0
   466
    if (year_ob_f_long(n).eq. 2005) then
forrest@0
   467
       year_setback = 2005 -2004
forrest@0
   468
    end if
forrest@0
   469
    
forrest@0
   470
    ntime = (nyear - year_setback) * nmonth
forrest@0
   471
forrest@0
   472
    data_ob   = new ((/nfield, nyear, nmonth/),float)
forrest@0
   473
forrest@0
   474
    diro = dir_root + station_long(n)+"/"
forrest@0
   475
    filo = year_ob_long(n)+"_L4_m.nc"
forrest@0
   476
    fo   = addfile (diro+filo,"r")
forrest@0
   477
forrest@0
   478
;   print (diro)
forrest@0
   479
;   print (filo)
forrest@0
   480
forrest@0
   481
    data_ob(0,:,:) = fo->NEE_or_fMDS
forrest@0
   482
    data_ob(1,:,:) = fo->Rg_f
forrest@0
   483
    data_ob(2,:,:) = fo->LE_f
forrest@0
   484
    data_ob(3,:,:) = fo->H_f
forrest@0
   485
    data_ob(4,:,:) = fo->GPP_or_MDS
forrest@0
   486
    data_ob(5,:,:) = fo->Reco_or
forrest@0
   487
forrest@0
   488
    delete (fo)
forrest@0
   489
forrest@0
   490
    timeI = new((/ntime/),integer)
forrest@0
   491
    timeF = new((/ntime/),float)
forrest@0
   492
    timeI = ispan(1,ntime,1)
forrest@0
   493
    timeF = year_ob_i_long(n) + (timeI-1)/12.
forrest@0
   494
    timeF@long_name = "year" 
forrest@0
   495
forrest@0
   496
    plot_data = new((/2,ntime/),float)
forrest@0
   497
 
forrest@0
   498
;----------------------------
forrest@0
   499
; for model_vs_ob
forrest@0
   500
forrest@0
   501
    plot_name = station_long(n)+"_tseries_vs_ob"
forrest@0
   502
    title = station_long(n)+"("+sprintf("%5.2f",lat_ob_long(n))+","+sprintf("%5.2f",lon_ob_long(n))+")"    
forrest@0
   503
    res@tiMainString = title
forrest@0
   504
forrest@0
   505
    wks = gsn_open_wks (plot_type,plot_name)
forrest@0
   506
    plot=new(nfield,graphic)                         ; create graphic array   
forrest@0
   507
forrest@0
   508
    i_year_mod_i = year_ob_i_long(n) - 1990 
forrest@0
   509
    i_year_mod_f = i_year_mod_i + nyear - 1 - year_setback
forrest@0
   510
forrest@0
   511
    i_year_ob_f =  nyear - year_setback - 1 
forrest@0
   512
forrest@0
   513
;   print (nyear)
forrest@0
   514
;   print (i_year_ob_f)
forrest@0
   515
;   print (i_year_mod_i)
forrest@0
   516
;   print (i_year_mod_f)
forrest@0
   517
forrest@0
   518
    do i = 0,nfield-1                           
forrest@0
   519
       plot_data(0,:) = ndtooned(data_ob (i,0:i_year_ob_f,:))
forrest@0
   520
       plot_data(1,:) = ndtooned(data_mod_long(i,i_year_mod_i:i_year_mod_f,:,n))
forrest@0
   521
       plot_data@long_name = field(i)+" ("+field_unit(i)+")"   
forrest@0
   522
       plot(i)=gsn_csm_xy(wks,timeF,plot_data,res)            ; create plot 
forrest@0
   523
    end do
forrest@0
   524
   
forrest@0
   525
    gsn_panel(wks,plot,(/3,2/),pres)                    ; create panel plot
forrest@0
   526
forrest@0
   527
    system("convert "+plot_name+"."+plot_type+" "+plot_name+"."+plot_type_new+";"+ \
forrest@0
   528
           "rm "+plot_name+"."+plot_type)
forrest@0
   529
forrest@0
   530
    clear (wks)  
forrest@0
   531
    delete (plot)
forrest@0
   532
forrest@0
   533
    delete (data_ob)
forrest@0
   534
    delete (timeI)    
forrest@0
   535
    delete (timeF)
forrest@0
   536
    delete (plot_data)
forrest@0
   537
forrest@0
   538
 end do
forrest@0
   539
forrest@0
   540
;###################################################################
forrest@0
   541
; for the following tables,
forrest@0
   542
; sort by latitude in decending order (N->S)
forrest@0
   543
forrest@0
   544
  isort = dim_pqsort(lat_ob_long,-1)
forrest@0
   545
forrest@0
   546
  station_sort = station_long(isort)
forrest@0
   547
  year_ob_sort = year_ob_long(isort)
forrest@0
   548
  lat_ob_sort  = lat_ob_long(isort)
forrest@0
   549
  lon_ob_sort  = lon_ob_long(isort)
forrest@0
   550
 
forrest@0
   551
; print(isort)
forrest@0
   552
; print(lat_ob_sort)
forrest@0
   553
forrest@0
   554
;*******************************************************************
forrest@0
   555
; html table of site: observed
forrest@0
   556
;*******************************************************************
forrest@0
   557
  output_html = "tseries_vs_ob.html"
forrest@0
   558
forrest@0
   559
  header = (/"<HTML>" \
forrest@0
   560
            ,"<HEAD>" \
forrest@0
   561
            ,"<TITLE>CLAMP metrics</TITLE>" \
forrest@0
   562
            ,"</HEAD>" \
forrest@0
   563
            ,"<H1>Timeseries at Site: "+model_name+" vs Observation</H1>" \
forrest@0
   564
            /) 
forrest@0
   565
  footer = "</HTML>"
forrest@0
   566
forrest@0
   567
  table_header = (/ \
forrest@0
   568
        "<table border=1 cellspacing=0 cellpadding=3 width=60%>" \
forrest@0
   569
       ,"<tr>" \
forrest@0
   570
       ,"   <th bgcolor=DDDDDD >Site Name</th>" \
forrest@0
   571
       ,"   <th bgcolor=DDDDDD >Latitude</th>" \
forrest@0
   572
       ,"   <th bgcolor=DDDDDD >Longitude</th>" \
forrest@0
   573
       ,"   <th bgcolor=DDDDDD >Observed</th>" \ 
forrest@0
   574
       ,"</tr>" \
forrest@0
   575
       /)
forrest@0
   576
  table_footer = "</table>"
forrest@0
   577
  row_header = "<tr>"
forrest@0
   578
  row_footer = "</tr>"
forrest@0
   579
forrest@0
   580
  lines = new(50000,string)
forrest@0
   581
  nline = 0
forrest@0
   582
forrest@0
   583
  set_line(lines,nline,header)
forrest@0
   584
  set_line(lines,nline,table_header)
forrest@0
   585
;-----------------------------------------------
forrest@0
   586
; row of table
forrest@0
   587
  
forrest@0
   588
  do n = 0,nstation_long-1
forrest@0
   589
forrest@0
   590
     set_line(lines,nline,row_header)
forrest@0
   591
forrest@0
   592
     txt0 = station_sort(n)
forrest@0
   593
     txt1 = sprintf("%5.2f", lat_ob_sort(n))
forrest@0
   594
     txt2 = sprintf("%5.2f", lon_ob_sort(n))
forrest@0
   595
     txt3 = year_ob_sort(n)
forrest@0
   596
forrest@0
   597
     set_line(lines,nline,"<th><a href="+txt0+"_tseries_vs_ob.png>"+txt0+"</a></th>")
forrest@0
   598
     set_line(lines,nline,"<th>"+txt1+"</th>")
forrest@0
   599
     set_line(lines,nline,"<th>"+txt2+"</th>")
forrest@0
   600
     set_line(lines,nline,"<th>"+txt3+"</th>")
forrest@0
   601
forrest@0
   602
     set_line(lines,nline,row_footer)
forrest@0
   603
  end do
forrest@0
   604
;-----------------------------------------------
forrest@0
   605
  set_line(lines,nline,table_footer)
forrest@0
   606
  set_line(lines,nline,footer) 
forrest@0
   607
forrest@0
   608
; Now write to an HTML file.
forrest@0
   609
  idx = ind(.not.ismissing(lines))
forrest@0
   610
  if(.not.any(ismissing(idx))) then
forrest@0
   611
    asciiwrite(output_html,lines(idx))
forrest@0
   612
  else
forrest@0
   613
   print ("error?")
forrest@0
   614
  end if
forrest@0
   615
  delete (idx)
forrest@0
   616
forrest@0
   617
  delete (isort)
forrest@0
   618
  delete (station_sort)
forrest@0
   619
  delete (year_ob_sort)
forrest@0
   620
  delete (lat_ob_sort)
forrest@0
   621
  delete (lon_ob_sort)
forrest@0
   622
forrest@0
   623
;************************************************************
forrest@0
   624
; compute annual cycle correlation coef and M score
forrest@0
   625
;************************************************************
forrest@0
   626
forrest@0
   627
 score_max = 5.
forrest@0
   628
forrest@0
   629
 ccr     = new ((/nstation, nfield/),float)
forrest@0
   630
 M_score = new ((/nstation, nfield/),float) 
forrest@0
   631
forrest@0
   632
 do n=0,nstation-1
forrest@0
   633
 do m=0,nfield-1   
forrest@0
   634
    ccr(n,m) = esccr(data_ob_ann(m,:,n),data_mod_ann(m,:,n),0)
forrest@0
   635
    bias = sum(abs(data_mod_ann(m,:,n)-data_ob_ann(m,:,n))/(abs(data_mod_ann(m,:,n))+abs(data_ob_ann(m,:,n))))
forrest@0
   636
    M_score(n,m) = (1. -(bias/nmonth)) * score_max
forrest@0
   637
 end do
forrest@0
   638
 end do
forrest@0
   639
forrest@0
   640
 M_co2 = avg(M_score(:,0))
forrest@0
   641
 M_rad = avg(M_score(:,1))
forrest@0
   642
 M_lh  = avg(M_score(:,2))
forrest@0
   643
 M_sh  = avg(M_score(:,3))
forrest@0
   644
 M_gpp = avg(M_score(:,4))
forrest@0
   645
 M_er  = avg(M_score(:,5))
forrest@0
   646
 M_all = M_co2+ M_rad +M_lh + M_sh + M_gpp + M_er
forrest@0
   647
forrest@0
   648
 M_energy_co2 = sprintf("%.2f", M_co2)
forrest@0
   649
 M_energy_rad = sprintf("%.2f", M_rad)
forrest@0
   650
 M_energy_lh  = sprintf("%.2f", M_lh )
forrest@0
   651
 M_energy_sh  = sprintf("%.2f", M_sh )
forrest@0
   652
 M_energy_gpp = sprintf("%.2f", M_gpp)
forrest@0
   653
 M_energy_er  = sprintf("%.2f", M_er )
forrest@0
   654
 M_energy_all = sprintf("%.2f", M_all)
forrest@0
   655
forrest@0
   656
;*******************************************************************
forrest@0
   657
; for station line plot
forrest@0
   658
;*******************************************************************
forrest@0
   659
forrest@0
   660
; for x-axis in xyplot
forrest@0
   661
  mon = ispan(1,12,1)
forrest@0
   662
  mon@long_name = "month"
forrest@0
   663
forrest@0
   664
;-------------------------------------------------------------------
forrest@0
   665
forrest@0
   666
  plot_data   = new((/2,nmonth/),float)
forrest@0
   667
  plot_data!0 = "case"
forrest@0
   668
  plot_data!1 = "month"
forrest@0
   669
forrest@0
   670
  do n = 0,nstation-1
forrest@0
   671
;----------------------------
forrest@0
   672
; for observed
forrest@0
   673
forrest@0
   674
    plot_name = station(n)+"_ob"    
forrest@0
   675
    title = station(n)+"("+sprintf("%5.2f",lat_ob(n))+","+sprintf("%5.2f",lon_ob(n))+")"
forrest@0
   676
    res@tiMainString = title
forrest@0
   677
forrest@0
   678
    wks = gsn_open_wks (plot_type,plot_name)
forrest@0
   679
    plot=new(nfield,graphic)                        ; create graphic array   
forrest@0
   680
forrest@0
   681
    do i = 0,nfield-1                           
forrest@0
   682
       plot_data(0,:) = (/data_ob_ann(i,:,n)/)
forrest@0
   683
       plot_data@long_name = field(i)+" ("+field_unit(i)+")"   
forrest@0
   684
       plot(i)=gsn_csm_xy(wks,mon,plot_data(0,:),res)    ; create plot 
forrest@0
   685
    end do
forrest@0
   686
forrest@0
   687
    gsn_panel(wks,plot,(/3,2/),pres)                 ; create panel plot
forrest@0
   688
forrest@0
   689
    system("convert "+plot_name+"."+plot_type+" "+plot_name+"."+plot_type_new+";"+ \
forrest@0
   690
           "rm "+plot_name+"."+plot_type)
forrest@0
   691
forrest@0
   692
    clear (wks)  
forrest@0
   693
    delete (plot)
forrest@0
   694
;----------------------------
forrest@0
   695
; for model_vs_ob
forrest@0
   696
forrest@0
   697
    plot_name = station(n)+"_model_vs_ob"
forrest@0
   698
    title = station(n)+"("+sprintf("%5.2f",lat_ob(n))+","+sprintf("%5.2f",lon_ob(n))+")"    
forrest@0
   699
    res@tiMainString = title
forrest@0
   700
forrest@0
   701
    wks = gsn_open_wks (plot_type,plot_name)
forrest@0
   702
    plot=new(nfield,graphic)                         ; create graphic array   
forrest@0
   703
forrest@0
   704
    do i = 0,nfield-1                           
forrest@0
   705
       plot_data(0,:) = (/data_ob_ann(i,:,n)/)
forrest@0
   706
       plot_data(1,:) = (/data_mod_ann(i,:,n)/)
forrest@0
   707
       plot_data@long_name = field(i)+" ("+field_unit(i)+")"   
forrest@0
   708
       plot(i)=gsn_csm_xy(wks,mon,plot_data,res)     ; create plot 
forrest@0
   709
    end do
forrest@0
   710
   
forrest@0
   711
    gsn_panel(wks,plot,(/3,2/),pres)                 ; create panel plot
forrest@0
   712
forrest@0
   713
    system("convert "+plot_name+"."+plot_type+" "+plot_name+"."+plot_type_new+";"+ \
forrest@0
   714
           "rm "+plot_name+"."+plot_type)
forrest@0
   715
forrest@0
   716
    clear (wks)  
forrest@0
   717
    delete (plot)
forrest@0
   718
 end do
forrest@0
   719
forrest@0
   720
;###################################################################
forrest@0
   721
; for the following tables,
forrest@0
   722
; sort by latitude in decending order (N->S)
forrest@0
   723
; sort by lat in decending order (N->S)
forrest@0
   724
forrest@0
   725
  isort = dim_pqsort(lat_ob,-1)
forrest@0
   726
forrest@0
   727
  station_sort = station(isort)
forrest@0
   728
  year_ob_sort = year_ob(isort)
forrest@0
   729
  lat_ob_sort  = lat_ob(isort)
forrest@0
   730
  lon_ob_sort  = lon_ob(isort)
forrest@0
   731
  M_score_sort = M_score(isort,:)
forrest@0
   732
 
forrest@0
   733
; print(isort)
forrest@0
   734
; print(lat_ob_sort)
forrest@0
   735
;###################################################################
forrest@0
   736
;*******************************************************************
forrest@0
   737
; html table of site: observed
forrest@0
   738
;*******************************************************************
forrest@0
   739
  output_html = "line_ob.html"
forrest@0
   740
forrest@0
   741
  header = (/"<HTML>" \
forrest@0
   742
            ,"<HEAD>" \
forrest@0
   743
            ,"<TITLE>CLAMP metrics</TITLE>" \
forrest@0
   744
            ,"</HEAD>" \
forrest@0
   745
            ,"<H1>Energy at Site: Observation</H1>" \
forrest@0
   746
            /) 
forrest@0
   747
  footer = "</HTML>"
forrest@0
   748
forrest@0
   749
  table_header = (/ \
forrest@0
   750
        "<table border=1 cellspacing=0 cellpadding=3 width=60%>" \
forrest@0
   751
       ,"<tr>" \
forrest@0
   752
       ,"   <th bgcolor=DDDDDD >Site Name</th>" \
forrest@0
   753
       ,"   <th bgcolor=DDDDDD >Latitude</th>" \
forrest@0
   754
       ,"   <th bgcolor=DDDDDD >Longitude</th>" \
forrest@0
   755
       ,"   <th bgcolor=DDDDDD >Observed</th>" \ 
forrest@0
   756
       ,"</tr>" \
forrest@0
   757
       /)
forrest@0
   758
  table_footer = "</table>"
forrest@0
   759
  row_header = "<tr>"
forrest@0
   760
  row_footer = "</tr>"
forrest@0
   761
forrest@0
   762
  lines = new(50000,string)
forrest@0
   763
  nline = 0
forrest@0
   764
forrest@0
   765
  set_line(lines,nline,header)
forrest@0
   766
  set_line(lines,nline,table_header)
forrest@0
   767
;-----------------------------------------------
forrest@0
   768
; row of table
forrest@0
   769
  
forrest@0
   770
  do n = 0,nstation-1
forrest@0
   771
     set_line(lines,nline,row_header)
forrest@0
   772
forrest@0
   773
     txt0 = station_sort(n)
forrest@0
   774
     txt1 = sprintf("%5.2f", lat_ob_sort(n))
forrest@0
   775
     txt2 = sprintf("%5.2f", lon_ob_sort(n))
forrest@0
   776
     txt3 = year_ob_sort(n)
forrest@0
   777
forrest@0
   778
     set_line(lines,nline,"<th><a href="+txt0+"_ob.png>"+txt0+"</a></th>")
forrest@0
   779
     set_line(lines,nline,"<th>"+txt1+"</th>")
forrest@0
   780
     set_line(lines,nline,"<th>"+txt2+"</th>")
forrest@0
   781
     set_line(lines,nline,"<th>"+txt3+"</th>")
forrest@0
   782
forrest@0
   783
     set_line(lines,nline,row_footer)
forrest@0
   784
  end do
forrest@0
   785
;-----------------------------------------------
forrest@0
   786
  set_line(lines,nline,table_footer)
forrest@0
   787
  set_line(lines,nline,footer) 
forrest@0
   788
forrest@0
   789
; Now write to an HTML file.
forrest@0
   790
  idx = ind(.not.ismissing(lines))
forrest@0
   791
  if(.not.any(ismissing(idx))) then
forrest@0
   792
    asciiwrite(output_html,lines(idx))
forrest@0
   793
  else
forrest@0
   794
   print ("error?")
forrest@0
   795
  end if
forrest@0
   796
  delete (idx)
forrest@0
   797
forrest@0
   798
;*******************************************************************
forrest@0
   799
; score and line table : model vs observed
forrest@0
   800
;*******************************************************************
forrest@0
   801
  output_html = "score+line_vs_ob.html"
forrest@0
   802
forrest@0
   803
  header = (/"<HTML>" \
forrest@0
   804
            ,"<HEAD>" \
forrest@0
   805
            ,"<TITLE>CLAMP metrics</TITLE>" \
forrest@0
   806
            ,"</HEAD>" \
forrest@0
   807
            ,"<H1>Energy at Site: Model "+model_name+"</H1>" \
forrest@0
   808
            /) 
forrest@0
   809
  footer = "</HTML>"
forrest@0
   810
forrest@0
   811
  delete (table_header)
forrest@0
   812
  table_header = (/ \
forrest@0
   813
        "<table border=1 cellspacing=0 cellpadding=3 width=100%>" \
forrest@0
   814
       ,"<tr>" \
forrest@0
   815
       ,"   <th bgcolor=DDDDDD >Site Name</th>" \
forrest@0
   816
       ,"   <th bgcolor=DDDDDD >Latitude</th>" \
forrest@0
   817
       ,"   <th bgcolor=DDDDDD >Longitude</th>" \
forrest@0
   818
       ,"   <th bgcolor=DDDDDD >Observed</th>" \
forrest@0
   819
       ,"   <th bgcolor=DDDDDD >CO2 Flux</th>" \
forrest@0
   820
       ,"   <th bgcolor=DDDDDD >Net Radiation</th>" \
forrest@0
   821
       ,"   <th bgcolor=DDDDDD >Latent Heat</th>" \
forrest@0
   822
       ,"   <th bgcolor=DDDDDD >Sensible Heat</th>" \
forrest@0
   823
       ,"   <th bgcolor=DDDDDD >GPP Glux</th>" \
forrest@0
   824
       ,"   <th bgcolor=DDDDDD >Respiration</th>" \
forrest@0
   825
       ,"   <th bgcolor=DDDDDD >Average</th>" \
forrest@0
   826
       ,"</tr>" \
forrest@0
   827
       /)
forrest@0
   828
  table_footer = "</table>"
forrest@0
   829
  row_header = "<tr>"
forrest@0
   830
  row_footer = "</tr>"
forrest@0
   831
forrest@0
   832
  lines = new(50000,string)
forrest@0
   833
  nline = 0
forrest@0
   834
forrest@0
   835
  set_line(lines,nline,header)
forrest@0
   836
  set_line(lines,nline,table_header)
forrest@0
   837
;-----------------------------------------------
forrest@0
   838
; row of table
forrest@0
   839
  
forrest@0
   840
  do n = 0,nstation-1
forrest@0
   841
     set_line(lines,nline,row_header)
forrest@0
   842
forrest@0
   843
     txt0  = station_sort(n)
forrest@0
   844
     txt1  = sprintf("%5.2f", lat_ob_sort(n))
forrest@0
   845
     txt2  = sprintf("%5.2f", lon_ob_sort(n))
forrest@0
   846
     txt3  = year_ob_sort(n)
forrest@0
   847
     txt4  = sprintf("%5.2f", M_score_sort(n,0))
forrest@0
   848
     txt5  = sprintf("%5.2f", M_score_sort(n,1))
forrest@0
   849
     txt6  = sprintf("%5.2f", M_score_sort(n,2))
forrest@0
   850
     txt7  = sprintf("%5.2f", M_score_sort(n,3))
forrest@0
   851
     txt8  = sprintf("%5.2f", M_score_sort(n,4))
forrest@0
   852
     txt9  = sprintf("%5.2f", M_score_sort(n,5))
forrest@0
   853
     txt10 = sprintf("%5.2f", avg(M_score_sort(n,:)))
forrest@0
   854
forrest@0
   855
     set_line(lines,nline,"<th><a href="+txt0+"_model_vs_ob.png>"+txt0+"</a></th>")
forrest@0
   856
     set_line(lines,nline,"<th>"+txt1+"</th>")
forrest@0
   857
     set_line(lines,nline,"<th>"+txt2+"</th>")
forrest@0
   858
     set_line(lines,nline,"<th>"+txt3+"</th>")
forrest@0
   859
     set_line(lines,nline,"<th>"+txt4+"</th>")
forrest@0
   860
     set_line(lines,nline,"<th>"+txt5+"</th>")
forrest@0
   861
     set_line(lines,nline,"<th>"+txt6+"</th>")
forrest@0
   862
     set_line(lines,nline,"<th>"+txt7+"</th>")
forrest@0
   863
     set_line(lines,nline,"<th>"+txt8+"</th>")
forrest@0
   864
     set_line(lines,nline,"<th>"+txt9+"</th>")
forrest@0
   865
     set_line(lines,nline,"<th>"+txt10+"</th>")
forrest@0
   866
forrest@0
   867
     set_line(lines,nline,row_footer)
forrest@0
   868
  end do
forrest@0
   869
forrest@0
   870
; last row, summary
forrest@0
   871
  set_line(lines,nline,row_header)
forrest@0
   872
forrest@0
   873
  txt0  = "All_"+sprintf("%.0f", nstation)
forrest@0
   874
  txt1  = "-"
forrest@0
   875
  txt2  = "-"
forrest@0
   876
  txt3  = "-"
forrest@0
   877
  txt4  = M_energy_co2
forrest@0
   878
  txt5  = M_energy_rad
forrest@0
   879
  txt6  = M_energy_lh
forrest@0
   880
  txt7  = M_energy_sh
forrest@0
   881
  txt8  = M_energy_gpp
forrest@0
   882
  txt9  = M_energy_er
forrest@0
   883
  txt10 = M_energy_all
forrest@0
   884
forrest@0
   885
  set_line(lines,nline,"<th>"+txt0+"</th>")
forrest@0
   886
  set_line(lines,nline,"<th>"+txt1+"</th>")
forrest@0
   887
  set_line(lines,nline,"<th>"+txt2+"</th>")
forrest@0
   888
  set_line(lines,nline,"<th>"+txt3+"</th>")
forrest@0
   889
  set_line(lines,nline,"<th>"+txt4+"</th>")
forrest@0
   890
  set_line(lines,nline,"<th>"+txt5+"</th>")
forrest@0
   891
  set_line(lines,nline,"<th>"+txt6+"</th>")
forrest@0
   892
  set_line(lines,nline,"<th>"+txt7+"</th>")
forrest@0
   893
  set_line(lines,nline,"<th>"+txt8+"</th>")
forrest@0
   894
  set_line(lines,nline,"<th>"+txt9+"</th>")
forrest@0
   895
  set_line(lines,nline,"<th>"+txt10+"</th>")
forrest@0
   896
forrest@0
   897
  set_line(lines,nline,row_footer)
forrest@0
   898
;-----------------------------------------------
forrest@0
   899
  set_line(lines,nline,table_footer)
forrest@0
   900
  set_line(lines,nline,footer) 
forrest@0
   901
forrest@0
   902
; Now write to an HTML file.
forrest@0
   903
  idx = ind(.not.ismissing(lines))
forrest@0
   904
  if(.not.any(ismissing(idx))) then
forrest@0
   905
    asciiwrite(output_html,lines(idx))
forrest@0
   906
  else
forrest@0
   907
   print ("error?")
forrest@0
   908
  end if
forrest@0
   909
  delete (idx)
forrest@0
   910
forrest@0
   911
;***************************************************************************
forrest@0
   912
; output plots
forrest@0
   913
;***************************************************************************
forrest@0
   914
  output_dir = model_name+"/ameriflux"
forrest@0
   915
forrest@0
   916
  system("mv *.png *.html " + output_dir) 
forrest@0
   917
;***************************************************************************
forrest@0
   918
end
forrest@0
   919