forrest@0
|
1 |
;********************************************************
|
forrest@0
|
2 |
; required command line input parameters:
|
forrest@0
|
3 |
; ncl 'model_name="10cn" model_grid="T42" dirm="/.../ film="..."' 01.npp.ncl
|
forrest@0
|
4 |
;
|
forrest@0
|
5 |
; histogram normalized by rain and compute correleration
|
forrest@0
|
6 |
;**************************************************************
|
forrest@0
|
7 |
load "$NCARG_ROOT/lib/ncarg/nclscripts/csm/gsn_code.ncl.test"
|
forrest@0
|
8 |
load "$NCARG_ROOT/lib/ncarg/nclscripts/csm/gsn_csm.ncl.test"
|
forrest@0
|
9 |
load "$NCARG_ROOT/lib/ncarg/nclscripts/csm/contributed.ncl"
|
forrest@0
|
10 |
;**************************************************************
|
forrest@0
|
11 |
procedure set_line(lines:string,nline:integer,newlines:string)
|
forrest@0
|
12 |
begin
|
forrest@0
|
13 |
; add line to ascci/html file
|
forrest@0
|
14 |
|
forrest@0
|
15 |
nnewlines = dimsizes(newlines)
|
forrest@0
|
16 |
if(nline+nnewlines-1.ge.dimsizes(lines))
|
forrest@0
|
17 |
print("set_line: bad index, not setting anything.")
|
forrest@0
|
18 |
return
|
forrest@0
|
19 |
end if
|
forrest@0
|
20 |
lines(nline:nline+nnewlines-1) = newlines
|
forrest@0
|
21 |
; print ("lines = " + lines(nline:nline+nnewlines-1))
|
forrest@0
|
22 |
nline = nline + nnewlines
|
forrest@0
|
23 |
return
|
forrest@0
|
24 |
end
|
forrest@0
|
25 |
;**************************************************************
|
forrest@0
|
26 |
; Main code.
|
forrest@0
|
27 |
begin
|
forrest@0
|
28 |
|
forrest@0
|
29 |
plot_type = "ps"
|
forrest@0
|
30 |
plot_type_new = "png"
|
forrest@0
|
31 |
|
forrest@0
|
32 |
;************************************************
|
forrest@0
|
33 |
; read data: model
|
forrest@0
|
34 |
;************************************************
|
forrest@0
|
35 |
|
forrest@0
|
36 |
model_grid = "T42"
|
forrest@0
|
37 |
|
forrest@0
|
38 |
model_name = "i01.06cn"
|
forrest@0
|
39 |
;model_name = "i01.06casa"
|
forrest@0
|
40 |
|
forrest@0
|
41 |
dirm = "/fis/cgd/cseg/people/jeff/clamp_data/model/"
|
forrest@0
|
42 |
film = model_name + "_1980-2004_ANN_climo.nc"
|
forrest@0
|
43 |
|
forrest@0
|
44 |
fm = addfile (dirm+film,"r")
|
forrest@0
|
45 |
|
forrest@0
|
46 |
xm = fm->lon
|
forrest@0
|
47 |
ym = fm->lat
|
forrest@0
|
48 |
|
forrest@0
|
49 |
pool = fm->WOODC
|
forrest@0
|
50 |
flux = fm->WOODC_ALLOC
|
forrest@0
|
51 |
|
forrest@0
|
52 |
;Units for these variables are:
|
forrest@0
|
53 |
;pool: g C/m^2
|
forrest@0
|
54 |
;flux: g C/m^2/s
|
forrest@0
|
55 |
|
forrest@0
|
56 |
nsec_per_year = 60*60*24*365
|
forrest@0
|
57 |
|
forrest@0
|
58 |
flux = flux * nsec_per_year
|
forrest@0
|
59 |
|
forrest@0
|
60 |
;************************************************
|
forrest@0
|
61 |
; read data: observed-biome
|
forrest@0
|
62 |
;************************************************
|
forrest@0
|
63 |
|
forrest@0
|
64 |
ob_name = "MODIS MOD 15A2 2000-2005"
|
forrest@0
|
65 |
|
forrest@0
|
66 |
diro = "/fis/cgd/cseg/people/jeff/clamp_data/lai/ob/"
|
forrest@0
|
67 |
filo = "land_class_"+model_grid+".nc"
|
forrest@0
|
68 |
|
forrest@0
|
69 |
fo = addfile(diro+filo,"r")
|
forrest@0
|
70 |
|
forrest@0
|
71 |
classob = tofloat(fo->LAND_CLASS)
|
forrest@0
|
72 |
|
forrest@0
|
73 |
nclass = 20
|
forrest@0
|
74 |
|
forrest@0
|
75 |
;*******************************************************************
|
forrest@0
|
76 |
; Calculate "nice" bins for binning the data in equally spaced ranges
|
forrest@0
|
77 |
;********************************************************************
|
forrest@0
|
78 |
|
forrest@0
|
79 |
nclassn = nclass + 1
|
forrest@0
|
80 |
range = fspan(0,nclassn-1,nclassn)
|
forrest@0
|
81 |
; print (range)
|
forrest@0
|
82 |
|
forrest@0
|
83 |
; Use this range information to grab all the values in a
|
forrest@0
|
84 |
; particular range, and then take an average.
|
forrest@0
|
85 |
|
forrest@0
|
86 |
nr = dimsizes(range)
|
forrest@0
|
87 |
nx = nr-1
|
forrest@0
|
88 |
xvalues = new((/2,nx/),float)
|
forrest@0
|
89 |
xvalues(0,:) = range(0:nr-2) + (range(1:)-range(0:nr-2))/2.
|
forrest@0
|
90 |
dx = xvalues(0,1) - xvalues(0,0) ; range width
|
forrest@0
|
91 |
dx4 = dx/4 ; 1/4 of the range
|
forrest@0
|
92 |
xvalues(1,:) = xvalues(0,:) - dx/5.
|
forrest@0
|
93 |
|
forrest@0
|
94 |
; get data
|
forrest@0
|
95 |
|
forrest@0
|
96 |
base_1D = ndtooned(classob)
|
forrest@0
|
97 |
data1_1D = ndtooned(pool)
|
forrest@0
|
98 |
data2_1D = ndtooned(flux)
|
forrest@0
|
99 |
|
forrest@0
|
100 |
; output
|
forrest@0
|
101 |
|
forrest@0
|
102 |
yvalues = new((/2,nx/),float)
|
forrest@0
|
103 |
|
forrest@0
|
104 |
do nd=0,1
|
forrest@0
|
105 |
|
forrest@0
|
106 |
; See if we are doing data1 (nd=0) or data2 (nd=1).
|
forrest@0
|
107 |
|
forrest@0
|
108 |
base = base_1D
|
forrest@0
|
109 |
|
forrest@0
|
110 |
if(nd.eq.0) then
|
forrest@0
|
111 |
data = data1_1D
|
forrest@0
|
112 |
else
|
forrest@0
|
113 |
data = data2_1D
|
forrest@0
|
114 |
end if
|
forrest@0
|
115 |
|
forrest@0
|
116 |
; Loop through each range, using base.
|
forrest@0
|
117 |
|
forrest@0
|
118 |
do i=0,nr-2
|
forrest@0
|
119 |
if (i.ne.(nr-2)) then
|
forrest@0
|
120 |
; print("")
|
forrest@0
|
121 |
; print("In range ["+range(i)+","+range(i+1)+")")
|
forrest@0
|
122 |
idx = ind((base.ge.range(i)).and.(base.lt.range(i+1)))
|
forrest@0
|
123 |
else
|
forrest@0
|
124 |
; print("")
|
forrest@0
|
125 |
; print("In range ["+range(i)+",)")
|
forrest@0
|
126 |
idx = ind(base.ge.range(i))
|
forrest@0
|
127 |
end if
|
forrest@0
|
128 |
|
forrest@0
|
129 |
; Calculate average
|
forrest@0
|
130 |
|
forrest@0
|
131 |
if(.not.any(ismissing(idx))) then
|
forrest@0
|
132 |
yvalues(nd,i) = avg(data(idx))
|
forrest@0
|
133 |
count = dimsizes(idx)
|
forrest@0
|
134 |
else
|
forrest@0
|
135 |
yvalues(nd,i) = yvalues@_FillValue
|
forrest@0
|
136 |
count = 0
|
forrest@0
|
137 |
end if
|
forrest@0
|
138 |
|
forrest@0
|
139 |
;#############################################################
|
forrest@0
|
140 |
; set the following 4 classes to _FillValue:
|
forrest@0
|
141 |
; Water Bodies(0), Urban and Build-Up(13),
|
forrest@0
|
142 |
; Permenant Snow and Ice(15), Unclassified(17)
|
forrest@0
|
143 |
|
forrest@0
|
144 |
if (i.eq.0 .or. i.eq.13 .or. i.eq.15 .or. i.eq.17) then
|
forrest@0
|
145 |
yvalues(nd,i) = yvalues@_FillValue
|
forrest@0
|
146 |
count = 0
|
forrest@0
|
147 |
end if
|
forrest@0
|
148 |
;#############################################################
|
forrest@0
|
149 |
|
forrest@0
|
150 |
; print(nd + ": " + count + " points, avg = " + yvalues(nd,i))
|
forrest@0
|
151 |
|
forrest@0
|
152 |
; Clean up for next time in loop.
|
forrest@0
|
153 |
|
forrest@0
|
154 |
delete(idx)
|
forrest@0
|
155 |
end do
|
forrest@0
|
156 |
|
forrest@0
|
157 |
delete(data)
|
forrest@0
|
158 |
end do
|
forrest@0
|
159 |
|
forrest@0
|
160 |
;============================
|
forrest@0
|
161 |
;compute turnover time
|
forrest@0
|
162 |
;============================
|
forrest@0
|
163 |
|
forrest@0
|
164 |
u = yvalues(0,:)
|
forrest@0
|
165 |
v = yvalues(1,:)
|
forrest@0
|
166 |
|
forrest@0
|
167 |
good = ind(.not.ismissing(u) .and. .not.ismissing(v))
|
forrest@0
|
168 |
|
forrest@0
|
169 |
uu = u(good)
|
forrest@0
|
170 |
vv = v(good)
|
forrest@0
|
171 |
|
forrest@0
|
172 |
n_biome = dimsizes(uu)
|
forrest@0
|
173 |
|
forrest@0
|
174 |
t_biome = new((/n_biome/),float)
|
forrest@0
|
175 |
|
forrest@0
|
176 |
t_biome = uu/vv
|
forrest@0
|
177 |
|
forrest@0
|
178 |
t_biome_avg = avg(t_biome)
|
forrest@0
|
179 |
|
forrest@0
|
180 |
;print (t_biome)
|
forrest@0
|
181 |
;print (t_biome_avg)
|
forrest@0
|
182 |
|
forrest@0
|
183 |
;===========================
|
forrest@0
|
184 |
; for html table - biome
|
forrest@0
|
185 |
;===========================
|
forrest@0
|
186 |
|
forrest@0
|
187 |
output_html = "table_biome.html"
|
forrest@0
|
188 |
|
forrest@0
|
189 |
; column (not including header column)
|
forrest@0
|
190 |
|
forrest@0
|
191 |
col_head = (/"WOOD Flux","WOOD Pool","WOOD Turnover Time"/)
|
forrest@0
|
192 |
|
forrest@0
|
193 |
ncol = dimsizes(col_head)
|
forrest@0
|
194 |
|
forrest@0
|
195 |
; row (not including header row)
|
forrest@0
|
196 |
; 4 classes removed: Water Bodies, Urban and Build-Up,
|
forrest@0
|
197 |
; Unclassified, Permanent Snow and Ice
|
forrest@0
|
198 |
|
forrest@0
|
199 |
row_head = (/"Evergreen Needleleaf Forests" \
|
forrest@0
|
200 |
,"Evergreen Broadleaf Forests" \
|
forrest@0
|
201 |
,"Deciduous Needleleaf Forest" \
|
forrest@0
|
202 |
,"Deciduous Broadleaf Forests" \
|
forrest@0
|
203 |
,"Mixed Forests" \
|
forrest@0
|
204 |
,"Closed Bushlands" \
|
forrest@0
|
205 |
,"Open Bushlands" \
|
forrest@0
|
206 |
,"Woody Savannas (S. Hem.)" \
|
forrest@0
|
207 |
,"Savannas (S. Hem.)" \
|
forrest@0
|
208 |
,"Grasslands" \
|
forrest@0
|
209 |
,"Permanent Wetlands" \
|
forrest@0
|
210 |
,"Croplands" \
|
forrest@0
|
211 |
,"Cropland/Natural Vegetation Mosaic" \
|
forrest@0
|
212 |
,"Barren or Sparsely Vegetated" \
|
forrest@0
|
213 |
,"Woody Savannas (N. Hem.)" \
|
forrest@0
|
214 |
,"Savannas (N. Hem.)" \
|
forrest@0
|
215 |
,"All Biome" \
|
forrest@0
|
216 |
/)
|
forrest@0
|
217 |
nrow = dimsizes(row_head)
|
forrest@0
|
218 |
|
forrest@0
|
219 |
; arrays to be passed to table.
|
forrest@0
|
220 |
text4 = new ((/nrow, ncol/),string )
|
forrest@0
|
221 |
|
forrest@0
|
222 |
do i=0,nrow-2
|
forrest@0
|
223 |
text4(i,0) = sprintf("%.1f",vv(i))
|
forrest@0
|
224 |
text4(i,1) = sprintf("%.1f",uu(i))
|
forrest@0
|
225 |
text4(i,2) = sprintf("%.1f",t_biome(i))
|
forrest@0
|
226 |
end do
|
forrest@0
|
227 |
text4(nrow-1,0) = "-"
|
forrest@0
|
228 |
text4(nrow-1,1) = "-"
|
forrest@0
|
229 |
text4(nrow-1,2) = sprintf("%.1f",t_biome_avg)
|
forrest@0
|
230 |
|
forrest@0
|
231 |
;**************************************************
|
forrest@0
|
232 |
; html table
|
forrest@0
|
233 |
;**************************************************
|
forrest@0
|
234 |
|
forrest@0
|
235 |
header_text = "<H1>WOOD Turnover Time: Model "+model_name+"</H1>"
|
forrest@0
|
236 |
|
forrest@0
|
237 |
header = (/"<HTML>" \
|
forrest@0
|
238 |
,"<HEAD>" \
|
forrest@0
|
239 |
,"<TITLE>CLAMP metrics</TITLE>" \
|
forrest@0
|
240 |
,"</HEAD>" \
|
forrest@0
|
241 |
,header_text \
|
forrest@0
|
242 |
/)
|
forrest@0
|
243 |
footer = "</HTML>"
|
forrest@0
|
244 |
|
forrest@0
|
245 |
table_header = (/ \
|
forrest@0
|
246 |
"<table border=1 cellspacing=0 cellpadding=3 width=60%>" \
|
forrest@0
|
247 |
,"<tr>" \
|
forrest@0
|
248 |
," <th bgcolor=DDDDDD >Biome Class</th>" \
|
forrest@0
|
249 |
," <th bgcolor=DDDDDD >"+col_head(0)+"</th>" \
|
forrest@0
|
250 |
," <th bgcolor=DDDDDD >"+col_head(1)+"</th>" \
|
forrest@0
|
251 |
," <th bgcolor=DDDDDD >"+col_head(2)+"</th>" \
|
forrest@0
|
252 |
,"</tr>" \
|
forrest@0
|
253 |
/)
|
forrest@0
|
254 |
table_footer = "</table>"
|
forrest@0
|
255 |
row_header = "<tr>"
|
forrest@0
|
256 |
row_footer = "</tr>"
|
forrest@0
|
257 |
|
forrest@0
|
258 |
lines = new(50000,string)
|
forrest@0
|
259 |
nline = 0
|
forrest@0
|
260 |
|
forrest@0
|
261 |
set_line(lines,nline,header)
|
forrest@0
|
262 |
set_line(lines,nline,table_header)
|
forrest@0
|
263 |
;-----------------------------------------------
|
forrest@0
|
264 |
;row of table
|
forrest@0
|
265 |
|
forrest@0
|
266 |
do n = 0,nrow-1
|
forrest@0
|
267 |
set_line(lines,nline,row_header)
|
forrest@0
|
268 |
|
forrest@0
|
269 |
txt1 = row_head(n)
|
forrest@0
|
270 |
txt2 = text4(n,0)
|
forrest@0
|
271 |
txt3 = text4(n,1)
|
forrest@0
|
272 |
txt4 = text4(n,2)
|
forrest@0
|
273 |
|
forrest@0
|
274 |
set_line(lines,nline,"<th>"+txt1+"</th>")
|
forrest@0
|
275 |
set_line(lines,nline,"<th>"+txt2+"</th>")
|
forrest@0
|
276 |
set_line(lines,nline,"<th>"+txt3+"</th>")
|
forrest@0
|
277 |
set_line(lines,nline,"<th>"+txt4+"</th>")
|
forrest@0
|
278 |
|
forrest@0
|
279 |
set_line(lines,nline,row_footer)
|
forrest@0
|
280 |
end do
|
forrest@0
|
281 |
;-----------------------------------------------
|
forrest@0
|
282 |
set_line(lines,nline,table_footer)
|
forrest@0
|
283 |
set_line(lines,nline,footer)
|
forrest@0
|
284 |
|
forrest@0
|
285 |
; Now write to an HTML file.
|
forrest@0
|
286 |
idx = ind(.not.ismissing(lines))
|
forrest@0
|
287 |
if(.not.any(ismissing(idx))) then
|
forrest@0
|
288 |
asciiwrite(output_html,lines(idx))
|
forrest@0
|
289 |
else
|
forrest@0
|
290 |
print ("error?")
|
forrest@0
|
291 |
end if
|
forrest@0
|
292 |
|
forrest@0
|
293 |
end
|
forrest@0
|
294 |
|