all/07.beta.ncl
changeset 0 0c6405ab2ff4
child 1 4be95183fbcd
equal deleted inserted replaced
-1:000000000000 0:e8a705c9968f
       
     1 ;********************************************************
       
     2 ; hardwired: co2_i = 283.1878
       
     3 ;            co2_f = 364.1252
       
     4 ;
       
     5 ;            beta_4_ob = 0.6
       
     6 ;**************************************************************
       
     7 load "$NCARG_ROOT/lib/ncarg/nclscripts/csm/gsn_code.ncl"
       
     8 load "$NCARG_ROOT/lib/ncarg/nclscripts/csm/gsn_csm.ncl"
       
     9 load "$NCARG_ROOT/lib/ncarg/nclscripts/csm/contributed.ncl"
       
    10 ;**************************************************************
       
    11 procedure set_line(lines:string,nline:integer,newlines:string) 
       
    12 begin
       
    13 ; add line to ascci/html file
       
    14     
       
    15   nnewlines = dimsizes(newlines)
       
    16   if(nline+nnewlines-1.ge.dimsizes(lines))
       
    17     print("set_line: bad index, not setting anything.") 
       
    18     return
       
    19   end if 
       
    20   lines(nline:nline+nnewlines-1) = newlines
       
    21 ;  print ("lines = " + lines(nline:nline+nnewlines-1))
       
    22   nline = nline + nnewlines
       
    23   return 
       
    24 end
       
    25 ;**************************************************************
       
    26 ; Main code.
       
    27 begin
       
    28  
       
    29  plot_type     = "ps"
       
    30  plot_type_new = "png"
       
    31 
       
    32 ;------------------------------------------------------
       
    33 ; edit table.html of current model for movel1_vs_model2
       
    34 
       
    35  if (isvar("compare")) then
       
    36     html_name2 = compare+"/table.html"  
       
    37     html_new2  = html_name2 +".new"
       
    38  end if
       
    39 
       
    40 ;-------------------------------------------------------
       
    41 ; edit table.html for current model
       
    42 
       
    43  html_name = model_name+"/table.html"  
       
    44  html_new  = html_name +".new"
       
    45 
       
    46 ;-------------------------------------------------------
       
    47 ; read model data
       
    48 
       
    49 ;###############################################################
       
    50 ; hardwired for model data 
       
    51 
       
    52 ; these values correspond to the start and the end of model data
       
    53  co2_i = 283.1878
       
    54  co2_f = 364.1252
       
    55 
       
    56  film_i = film6
       
    57  film_f = film5
       
    58 ;###############################################################
       
    59 
       
    60  fm_i   = addfile (dirm+film_i,"r")
       
    61  fm_f   = addfile (dirm+film_f,"r")
       
    62   
       
    63  xm     = fm_f->lon  
       
    64  ym     = fm_f->lat
       
    65 
       
    66  npp_i  = fm_i->NPP
       
    67  npp_f  = fm_f->NPP
       
    68 
       
    69  delete (fm_i)
       
    70  delete (fm_f)
       
    71 
       
    72 ;Units for these variables are:
       
    73 ;npp_i: g C/m^2/s
       
    74 
       
    75  nsec_per_year = 60*60*24*365
       
    76   
       
    77  npp_i = npp_i *  nsec_per_year
       
    78  npp_f = npp_f *  nsec_per_year
       
    79 
       
    80  unit = "gC/m2/year"
       
    81 
       
    82 ;------------------------------
       
    83 ; get landfrac data
       
    84 
       
    85  film_l   = "lnd_" + model_grid + ".nc"
       
    86  fm_l     = addfile (dirs+film_l,"r")  
       
    87  landfrac = fm_l->landfrac
       
    88 
       
    89  npp_i(0,:,:) = npp_i(0,:,:) * landfrac(:,:)
       
    90  npp_f(0,:,:) = npp_f(0,:,:) * landfrac(:,:)
       
    91 
       
    92  delete (fm_l)
       
    93  delete (landfrac) 
       
    94 
       
    95 ;-----------------------------
       
    96 ; read biome data: model
       
    97 
       
    98   biome_name_mod = "Model PFT Class"
       
    99 
       
   100   film_c   = "class_pft_"+model_grid+".nc"
       
   101   fm_c     = addfile (dirs+film_c,"r") 
       
   102   classmod = fm_c->CLASS_PFT               
       
   103 
       
   104   delete (fm_c)
       
   105 
       
   106 ; model data has 17 land-type classes
       
   107   nclass_mod = 17
       
   108    
       
   109 ;---------------------------------------------------
       
   110 ; read data: observed at stations
       
   111 
       
   112  station = (/"DukeFACE" \
       
   113             ,"AspenFACE" \
       
   114             ,"ORNL-FACE" \
       
   115             ,"POP-EUROFACE" \
       
   116             /)
       
   117 
       
   118  lat_ob  = (/ 35.58,  45.40,  35.54, 42.22/)
       
   119  lon_ob  = (/-79.05, -89.37, -84.20, 11.48/)
       
   120  lon_obx = where(lon_ob.lt.0.,lon_ob+360.,lon_ob)
       
   121 
       
   122  n_sta  = dimsizes(station)
       
   123  beta_4_ob = new((/n_sta/),float)
       
   124 
       
   125 ;###################################################
       
   126 ; this is a hardwired value
       
   127  beta_4_ob = 0.60
       
   128 ;###################################################
       
   129 ;---------------------------------------------------
       
   130 ; get model data at station 
       
   131 
       
   132  npp_i_4  =linint2_points(xm,ym,npp_i,True,lon_obx,lat_ob,0)
       
   133 
       
   134  npp_f_4  =linint2_points(xm,ym,npp_f,True,lon_obx,lat_ob,0)
       
   135 
       
   136 ;---------------------------------------------------
       
   137 ;compute beta_4
       
   138 
       
   139  score_max = 3.
       
   140 
       
   141  beta_4 = new((/n_sta/),float)
       
   142 
       
   143  beta_4 = ((npp_f_4/npp_i_4) - 1.)/log(co2_f/co2_i)
       
   144 
       
   145  beta_4_avg = avg(beta_4)
       
   146 
       
   147  bias   = sum(abs(beta_4-beta_4_ob)/(abs(beta_4)+abs(beta_4_ob))) 
       
   148  Mbeta  = (1. - (bias/n_sta))*score_max
       
   149  M_beta = sprintf("%.2f", Mbeta)
       
   150 
       
   151 ;=========================
       
   152 ; for html table - station
       
   153 ;=========================
       
   154 
       
   155   output_html = "table_station.html"
       
   156 
       
   157 ; column (not including header column)
       
   158 
       
   159   col_head = (/"Latitude","Longitude","CO2_i","CO2_f","NPP_i","NPP_f","Beta_model","Beta_ob"/)
       
   160 
       
   161   ncol = dimsizes(col_head)
       
   162 
       
   163 ; row (not including header row)
       
   164   row_head = (/"DukeFACE" \
       
   165               ,"AspenFACE" \
       
   166               ,"ORNL-FACE" \
       
   167               ,"POP-EUROFACE" \
       
   168               ,"All Station" \                
       
   169               /)  
       
   170   nrow = dimsizes(row_head)                  
       
   171 
       
   172 ; arrays to be passed to table. 
       
   173   text = new ((/nrow, ncol/),string )
       
   174 
       
   175  do i=0,nrow-2
       
   176   text(i,0) = sprintf("%.1f",lat_ob(i))
       
   177   text(i,1) = sprintf("%.1f",lon_ob(i))
       
   178   text(i,2) = sprintf("%.1f",co2_i)
       
   179   text(i,3) = sprintf("%.1f",co2_f)
       
   180   text(i,4) = sprintf("%.1f",npp_i_4(0,i))
       
   181   text(i,5) = sprintf("%.1f",npp_f_4(0,i))
       
   182   text(i,6) = sprintf("%.2f",beta_4(i))
       
   183   text(i,7) = "-"
       
   184  end do
       
   185   text(nrow-1,0) = "-"
       
   186   text(nrow-1,1) = "-"
       
   187   text(nrow-1,2) = "-"
       
   188   text(nrow-1,3) = "-"
       
   189   text(nrow-1,4) = "-"
       
   190   text(nrow-1,5) = "-"
       
   191   text(nrow-1,6) = sprintf("%.2f",beta_4_avg)
       
   192   text(nrow-1,7) = sprintf("%.2f",avg(beta_4_ob))
       
   193 
       
   194 ;-----------
       
   195 ; html table
       
   196 ;-----------
       
   197 
       
   198   header_text = "<H1>Beta Factor: Model "+model_name+"</H1>" 
       
   199 
       
   200   header = (/"<HTML>" \
       
   201             ,"<HEAD>" \
       
   202             ,"<TITLE>CLAMP metrics</TITLE>" \
       
   203             ,"</HEAD>" \
       
   204             ,header_text \
       
   205             /) 
       
   206   footer = "</HTML>"
       
   207 
       
   208   table_header = (/ \
       
   209         "<table border=1 cellspacing=0 cellpadding=3 width=80%>" \
       
   210        ,"<tr>" \
       
   211        ,"   <th bgcolor=DDDDDD >Station</th>" \
       
   212        ,"   <th bgcolor=DDDDDD >"+col_head(0)+"</th>" \
       
   213        ,"   <th bgcolor=DDDDDD >"+col_head(1)+"</th>" \
       
   214        ,"   <th bgcolor=DDDDDD >"+col_head(2)+"</th>" \
       
   215        ,"   <th bgcolor=DDDDDD >"+col_head(3)+"</th>" \
       
   216        ,"   <th bgcolor=DDDDDD >"+col_head(4)+"<br>("+unit+")</th>" \
       
   217        ,"   <th bgcolor=DDDDDD >"+col_head(5)+"<br>("+unit+")</th>" \
       
   218        ,"   <th bgcolor=DDDDDD >"+col_head(6)+"</th>" \
       
   219        ,"   <th bgcolor=DDDDDD >"+col_head(7)+"</th>" \
       
   220        ,"</tr>" \
       
   221        /)
       
   222   table_footer = "</table>"
       
   223   row_header = "<tr>"
       
   224   row_footer = "</tr>"
       
   225 
       
   226   lines = new(50000,string)
       
   227   nline = 0
       
   228 
       
   229   set_line(lines,nline,header)
       
   230   set_line(lines,nline,table_header)
       
   231 ;-----------------------------------------------
       
   232 ;row of table
       
   233 
       
   234   do n = 0,nrow-1
       
   235      set_line(lines,nline,row_header)
       
   236 
       
   237      txt1 = row_head(n)
       
   238      txt2 = text(n,0)
       
   239      txt3 = text(n,1)
       
   240      txt4 = text(n,2)
       
   241      txt5 = text(n,3)
       
   242      txt6 = text(n,4)
       
   243      txt7 = text(n,5)
       
   244      txt8 = text(n,6)
       
   245      txt9 = text(n,7)
       
   246 
       
   247      set_line(lines,nline,"<th>"+txt1+"</th>")
       
   248      set_line(lines,nline,"<th>"+txt2+"</th>")
       
   249      set_line(lines,nline,"<th>"+txt3+"</th>")
       
   250      set_line(lines,nline,"<th>"+txt4+"</th>")
       
   251      set_line(lines,nline,"<th>"+txt5+"</th>")
       
   252      set_line(lines,nline,"<th>"+txt6+"</th>")
       
   253      set_line(lines,nline,"<th>"+txt7+"</th>")
       
   254      set_line(lines,nline,"<th>"+txt8+"</th>")
       
   255      set_line(lines,nline,"<th>"+txt9+"</th>")
       
   256 
       
   257      set_line(lines,nline,row_footer)
       
   258   end do
       
   259 ;-----------------------------------------------
       
   260   set_line(lines,nline,table_footer)
       
   261   set_line(lines,nline,footer) 
       
   262 
       
   263 ; Now write to an HTML file.
       
   264   idx = ind(.not.ismissing(lines))
       
   265   if(.not.any(ismissing(idx))) then
       
   266     asciiwrite(output_html,lines(idx))
       
   267   else
       
   268    print ("error?")
       
   269   end if
       
   270 
       
   271   delete (col_head)
       
   272   delete (row_head)
       
   273   delete (text)
       
   274   delete (table_header)
       
   275   delete (idx)
       
   276 
       
   277 ;********************************************************************
       
   278 ; use land-type class to bin the data in equally spaced ranges
       
   279 ;********************************************************************
       
   280 
       
   281 ; using model biome class
       
   282   nclass = nclass_mod
       
   283 
       
   284   range  = fspan(0,nclass,nclass+1)
       
   285 
       
   286 ; Use this range information to grab all the values in a
       
   287 ; particular range, and then take an average.
       
   288 
       
   289   nx = dimsizes(range) - 1
       
   290 
       
   291 ;==============================
       
   292 ; put data into bins
       
   293 ;==============================
       
   294 
       
   295 ; for model data and observed
       
   296   data_n = 2
       
   297 
       
   298 ; using model biome class
       
   299 
       
   300   base = ndtooned(classmod)
       
   301 
       
   302 ; output
       
   303 
       
   304   yvalues = new((/data_n,nx/),float)
       
   305   count   = new((/data_n,nx/),float)
       
   306 
       
   307 ; Loop through each range, using base
       
   308 
       
   309   do i=0,nx-1
       
   310 
       
   311      if (i.ne.(nx-1)) then
       
   312         idx = ind((base.ge.range(i)).and.(base.lt.range(i+1)))
       
   313      else
       
   314         idx = ind(base.ge.range(i))
       
   315      end if
       
   316 
       
   317 ;    loop through each dataset
       
   318  
       
   319      do n = 0,data_n-1
       
   320 
       
   321         if (n .eq. 0) then
       
   322            data = ndtooned(npp_i)
       
   323         end if
       
   324 
       
   325         if (n .eq. 1) then
       
   326            data = ndtooned(npp_f)
       
   327         end if
       
   328 
       
   329 ;       Calculate average 
       
   330 
       
   331         if (.not.any(ismissing(idx))) then
       
   332            yvalues(n,i) = avg(data(idx))
       
   333            count(n,i)   = dimsizes(idx)
       
   334         else
       
   335            yvalues(n,i) = yvalues@_FillValue
       
   336            count(n,i)   = 0
       
   337         end if
       
   338 
       
   339 ;#############################################################
       
   340 ; using model biome class:
       
   341 ;
       
   342 ;     set the following 4 classes to _FillValue:
       
   343 ;     (3)Needleleaf Deciduous Boreal Tree,
       
   344 ;     (8)Broadleaf Deciduous Boreal Tree,
       
   345 ;     (9)Broadleaf Evergreen Shrub,
       
   346 ;     (16)Wheat
       
   347 
       
   348       if (i.eq.3 .or. i.eq.8 .or. i.eq.9 .or. i.eq.16) then
       
   349          yvalues(n,i) = yvalues@_FillValue
       
   350          count(n,i)   = 0
       
   351       end if
       
   352 ;############################################################# 
       
   353 
       
   354       delete(data)
       
   355     end do                 ; n-loop
       
   356 
       
   357     delete(idx)
       
   358   end do                   ; i-loop
       
   359 
       
   360   delete (base)
       
   361   delete (npp_i)
       
   362   delete (npp_f)
       
   363 
       
   364 ;============================
       
   365 ;compute beta
       
   366 ;============================
       
   367 
       
   368  u       = yvalues(0,:)
       
   369  v       = yvalues(1,:)
       
   370  u_count = count(0,:)
       
   371  v_count = count(1,:)
       
   372 
       
   373  good = ind(.not.ismissing(u) .and. .not.ismissing(v))
       
   374 
       
   375  uu       = u(good)
       
   376  vv       = v(good)
       
   377  uu_count = u_count(good)
       
   378  vv_count = v_count(good) 
       
   379 
       
   380  n_biome = dimsizes(uu)
       
   381  beta_biome = new((/n_biome/),float)
       
   382 
       
   383  beta_biome = ((vv/uu) - 1.)/log(co2_f/co2_i)
       
   384 
       
   385  beta_biome_avg = (sum(vv*vv_count)/sum(uu*uu_count) - 1.)/log(co2_f/co2_i)
       
   386 
       
   387 ;===========================
       
   388 ; for html table - biome
       
   389 ;===========================
       
   390 
       
   391   output_html = "table_biome.html"
       
   392 
       
   393 ; column (not including header column)
       
   394 
       
   395   col_head = (/"CO2_i","CO2_f","NPP_i","NPP_f","Beta_model"/)
       
   396 
       
   397   ncol = dimsizes(col_head)
       
   398 
       
   399 ; row (not including header row)
       
   400 
       
   401 ;----------------------------------------------------
       
   402 ; using model biome class:
       
   403 ;  
       
   404   row_head  = (/"Not Vegetated" \
       
   405                ,"Needleleaf Evergreen Temperate Tree" \
       
   406                ,"Needleleaf Evergreen Boreal Tree" \
       
   407 ;              ,"Needleleaf Deciduous Boreal Tree" \
       
   408                ,"Broadleaf Evergreen Tropical Tree" \
       
   409                ,"Broadleaf Evergreen Temperate Tree" \
       
   410                ,"Broadleaf Deciduous Tropical Tree" \
       
   411                ,"Broadleaf Deciduous Temperate Tree" \
       
   412 ;              ,"Broadleaf Deciduous Boreal Tree" \
       
   413 ;              ,"Broadleaf Evergreen Shrub" \
       
   414                ,"Broadleaf Deciduous Temperate Shrub" \
       
   415                ,"Broadleaf Deciduous Boreal Shrub" \
       
   416                ,"C3 Arctic Grass" \
       
   417                ,"C3 Non-Arctic Grass" \
       
   418                ,"C4 Grass" \
       
   419                ,"Corn" \
       
   420 ;              ,"Wheat" \                      
       
   421                ,"All Biome" \                
       
   422                /)  
       
   423 
       
   424   nrow = dimsizes(row_head)                  
       
   425 
       
   426 ; arrays to be passed to table. 
       
   427   text = new ((/nrow, ncol/),string )
       
   428  
       
   429  do i=0,nrow-2
       
   430   text(i,0) = sprintf("%.1f",co2_i)
       
   431   text(i,1) = sprintf("%.1f",co2_f)
       
   432   text(i,2) = sprintf("%.1f",uu(i))
       
   433   text(i,3) = sprintf("%.1f",vv(i))
       
   434   text(i,4) = sprintf("%.2f",beta_biome(i))
       
   435  end do
       
   436   text(nrow-1,0) = "-"
       
   437   text(nrow-1,1) = "-"
       
   438   text(nrow-1,2) = "-"
       
   439   text(nrow-1,3) = "-"
       
   440   text(nrow-1,4) = sprintf("%.2f",beta_biome_avg)
       
   441 
       
   442 ;**************************************************
       
   443 ; html table
       
   444 ;**************************************************
       
   445 
       
   446   header_text = "<H1>Beta Factor: Model "+model_name+"</H1>" 
       
   447 
       
   448   header = (/"<HTML>" \
       
   449             ,"<HEAD>" \
       
   450             ,"<TITLE>CLAMP metrics</TITLE>" \
       
   451             ,"</HEAD>" \
       
   452             ,header_text \
       
   453             /) 
       
   454   footer = "</HTML>"
       
   455 
       
   456   table_header = (/ \
       
   457         "<table border=1 cellspacing=0 cellpadding=3 width=80%>" \
       
   458        ,"<tr>" \
       
   459        ,"   <th bgcolor=DDDDDD >Biome Class</th>" \
       
   460        ,"   <th bgcolor=DDDDDD >"+col_head(0)+"</th>" \
       
   461        ,"   <th bgcolor=DDDDDD >"+col_head(1)+"</th>" \
       
   462        ,"   <th bgcolor=DDDDDD >"+col_head(2)+"</th>" \
       
   463        ,"   <th bgcolor=DDDDDD >"+col_head(3)+"</th>" \
       
   464        ,"   <th bgcolor=DDDDDD >"+col_head(4)+"</th>" \
       
   465        ,"</tr>" \
       
   466        /)
       
   467   table_footer = "</table>"
       
   468   row_header = "<tr>"
       
   469   row_footer = "</tr>"
       
   470 
       
   471   lines = new(50000,string)
       
   472   nline = 0
       
   473 
       
   474   set_line(lines,nline,header)
       
   475   set_line(lines,nline,table_header)
       
   476 ;-----------------------------------------------
       
   477 ;row of table
       
   478 
       
   479   do n = 0,nrow-1
       
   480      set_line(lines,nline,row_header)
       
   481 
       
   482      txt1  = row_head(n)
       
   483      txt2  = text(n,0)
       
   484      txt3  = text(n,1)
       
   485      txt4  = text(n,2)
       
   486      txt5  = text(n,3)
       
   487      txt6  = text(n,4)
       
   488 
       
   489      set_line(lines,nline,"<th>"+txt1+"</th>")
       
   490      set_line(lines,nline,"<th>"+txt2+"</th>")
       
   491      set_line(lines,nline,"<th>"+txt3+"</th>")
       
   492      set_line(lines,nline,"<th>"+txt4+"</th>")
       
   493      set_line(lines,nline,"<th>"+txt5+"</th>")
       
   494      set_line(lines,nline,"<th>"+txt6+"</th>")
       
   495 
       
   496      set_line(lines,nline,row_footer)
       
   497   end do
       
   498 ;-----------------------------------------------
       
   499   set_line(lines,nline,table_footer)
       
   500   set_line(lines,nline,footer) 
       
   501 
       
   502 ; Now write to an HTML file
       
   503 
       
   504   idx = ind(.not.ismissing(lines))
       
   505   if(.not.any(ismissing(idx))) then
       
   506     asciiwrite(output_html,lines(idx))
       
   507   else
       
   508    print ("error?")
       
   509   end if
       
   510   delete (idx)
       
   511 
       
   512 ;**************************************************************************************
       
   513 ; update score
       
   514 ;**************************************************************************************
       
   515   if (isvar("compare")) then
       
   516      system("sed -e '1,/M_beta/s/M_beta/"+M_beta+"/' "+html_name2+" > "+html_new2+";"+ \
       
   517             "mv -f "+html_new2+" "+html_name2)
       
   518   end if
       
   519 
       
   520   system("sed s#M_beta#"+M_beta+"# "+html_name+" > "+html_new+";"+ \
       
   521          "mv -f "+html_new+" "+html_name)
       
   522 
       
   523 ;***************************************************************************
       
   524 ; get total score and write to file
       
   525 ;***************************************************************************
       
   526   M_total = Mbeta
       
   527 
       
   528   asciiwrite("M_save.beta", M_total)
       
   529 
       
   530   delete (M_total)
       
   531 
       
   532 ;***************************************************************************
       
   533 ; output plot and html
       
   534 ;***************************************************************************
       
   535   output_dir = model_name+"/beta"
       
   536 
       
   537   system("mv *.html " + output_dir) 
       
   538 ;***************************************************************************
       
   539 
       
   540 end
       
   541