ameriflux/11.plot.ncl
changeset 0 0c6405ab2ff4
equal deleted inserted replaced
-1:000000000000 0:a2a5f17a2fb8
       
     1 ;************************************************************
       
     2 ; required command line input parameters:
       
     3 ;  ncl 'model_name="10cn" model_grid="T42" dirm="/.../ film="..."' 01.npp.ncl
       
     4 ;
       
     5 ; using gsn_table for all
       
     6 ; output: line plot for each site (4 fields)
       
     7 ;         table for M_score
       
     8 ;************************************************************
       
     9 load "$NCARG_ROOT/lib/ncarg/nclscripts/csm/gsn_code.ncl"
       
    10 load "$NCARG_ROOT/lib/ncarg/nclscripts/csm/gsn_csm.ncl"
       
    11 load "$NCARG_ROOT/lib/ncarg/nclscripts/csm/contributed.ncl"
       
    12 ;************************************************************
       
    13 procedure set_line(lines:string,nline:integer,newlines:string) 
       
    14 begin
       
    15 ; add line to ascci/html file
       
    16     
       
    17   nnewlines = dimsizes(newlines)
       
    18   if(nline+nnewlines-1.ge.dimsizes(lines))
       
    19     print("set_line: bad index, not setting anything.") 
       
    20     return
       
    21   end if 
       
    22   lines(nline:nline+nnewlines-1) = newlines
       
    23 ;  print ("lines = " + lines(nline:nline+nnewlines-1))
       
    24   nline = nline + nnewlines
       
    25   return 
       
    26 end
       
    27 ;*************************************************************
       
    28 begin
       
    29 
       
    30   plot_type     = "ps"
       
    31   plot_type_new = "png"
       
    32 
       
    33 ; for 6 fields, 12-monthly
       
    34   nmon      = 12
       
    35   nfield    = 6
       
    36 
       
    37 ;************************************************
       
    38 ; read model data
       
    39 ;************************************************
       
    40 ; model = "cn"
       
    41   model = "casa"
       
    42   
       
    43   model_name = "i01.10" + model
       
    44 
       
    45   dirm  = "/fis/cgd/cseg/people/jeff/surface_data/"
       
    46   film  = "lnd_T42.nc"
       
    47   fm    = addfile(dirm+film,"r")
       
    48   
       
    49   xm    = fm->lon
       
    50   ym    = fm->lat
       
    51 ;------------------------------------------------
       
    52   nlat = dimsizes(ym)
       
    53   nlon = dimsizes(xm)
       
    54 
       
    55   data_mod0 = new ((/nfield,nmon,nlat,nlon/),float)
       
    56 
       
    57 ; change to unit of observed (u mol/m2/s)
       
    58 ; Model_units [=] gC/m2/s
       
    59 ; 12. = molecular weight of C
       
    60 ; u mol = 1e-6 mol
       
    61   factor = 1e6 /12.
       
    62 
       
    63   ENERGY ="new"
       
    64 
       
    65 ;************************************************
       
    66 ; read data: observed
       
    67 ;************************************************
       
    68 
       
    69  station = (/"Duke_Forest_Hardwoods" \
       
    70             ,"Duke_Forest_Open_Field" \
       
    71             ,"Duke_Forest_Pine" \
       
    72             ,"HarvardForest" \
       
    73             /)
       
    74 
       
    75  year_ob = (/"2003-2005" \
       
    76             ,"2001-2005" \
       
    77             ,"2001-2005" \
       
    78             ,"1991-2004" \
       
    79             /)
       
    80 
       
    81  field   = (/"CO2 Flux" \
       
    82             ,"Net Radiation" \
       
    83             ,"Latent Heat" \
       
    84             ,"Sensible Heat" \
       
    85             ,"GPP Flux" \
       
    86             ,"Respiration" \
       
    87             /)
       
    88 
       
    89  nstation  = dimsizes(station)
       
    90 
       
    91  data_mod  = new ((/nstation, nfield, nmon/),float)
       
    92  data_ob   = new ((/nstation, nfield, nmon/),float)
       
    93  lat_ob    = new ((/nstation/),float)
       
    94  lon_ob    = new ((/nstation/),float)
       
    95 
       
    96  diro_root  = "/fis/cgd/cseg/people/jeff/clamp/ameriflux/"
       
    97  dirm_root  = "/fis/cgd/cseg/people/jeff/clamp_data/model/"
       
    98 
       
    99  do n = 0,nstation-1
       
   100 
       
   101 ;-------------------------------------------------
       
   102 ;   get ob data
       
   103 
       
   104     diro = diro_root + station(n)+"/"
       
   105     filo = year_ob(n)+"_L4_m.nc"
       
   106     fo   = addfile (diro+filo,"r")
       
   107 
       
   108     print (filo)
       
   109  
       
   110     lon_ob(n) = fo->lon 
       
   111     lat_ob(n) = fo->lat
       
   112 
       
   113     data      = fo->NEE_or_fMDS
       
   114     data_ob(n,0,:) = dim_avg(data(month|:,year|:))
       
   115     delete (data)
       
   116 
       
   117     data      = fo->Rg_f
       
   118     data_ob(n,1,:) = dim_avg(data(month|:,year|:))
       
   119     delete (data)
       
   120 
       
   121     data      = fo->LE_f
       
   122     data_ob(n,2,:) = dim_avg(data(month|:,year|:))
       
   123     delete (data)
       
   124 
       
   125     data      = fo->H_f
       
   126     data_ob(n,3,:) = dim_avg(data(month|:,year|:))
       
   127     delete (data)
       
   128 
       
   129     data      = fo->GPP_or_MDS
       
   130     data_ob(n,4,:) = dim_avg(data(month|:,year|:))
       
   131     delete (data)
       
   132 
       
   133     data      = fo->Reco_or
       
   134     data_ob(n,5,:) = dim_avg(data(month|:,year|:))
       
   135     delete (data)
       
   136 
       
   137     delete (fo)
       
   138 ;---------------------------------------------------
       
   139 ;   get model data
       
   140 
       
   141     film = model_name+"_"+year_ob(n)+"_MONS_climo.nc"
       
   142     fm   = addfile (dirm_root+film,"r")
       
   143 
       
   144     print (film)
       
   145 
       
   146 if (ENERGY .eq. "old") then
       
   147 
       
   148   data = fm->NEE
       
   149   data_mod0(0,:,:,:) = data(:,:,:) * factor
       
   150   delete (data)
       
   151 
       
   152 ; data  = fm->LATENT
       
   153   data1 = fm->FCEV
       
   154   data2 = fm->FCTR
       
   155   data3 = fm->FGEV
       
   156   data_mod0(2,:,:,:) = data1(:,:,:)+data2(:,:,:)+data3(:,:,:) 
       
   157   delete (data1)
       
   158   delete (data2)
       
   159   delete (data3)
       
   160 
       
   161 ; data = fm->SENSIBLE
       
   162   data  = fm->FSH
       
   163   data_mod0(3,:,:,:) = data(:,:,:) 
       
   164   delete (data)
       
   165 
       
   166 ; data  = fm->NETRAD
       
   167   data1 = fm->FSA
       
   168   data2 = fm->FIRA
       
   169   data_mod0(1,:,:,:) = data1(:,:,:)-data2(:,:,:)-data_mod0(2,:,:,:)-data_mod0(3,:,:,:) 
       
   170   delete (data1)
       
   171   delete (data2)
       
   172 
       
   173 else
       
   174 
       
   175   data = fm->NEE
       
   176   data_mod0(0,:,:,:) = data(:,:,:) * factor
       
   177   delete (data)
       
   178 
       
   179   data = fm->NETRAD
       
   180   data_mod0(1,:,:,:) = data(:,:,:) 
       
   181   delete (data)
       
   182 
       
   183   data = fm->LATENT
       
   184   data_mod0(2,:,:,:) = data(:,:,:) 
       
   185   delete (data)
       
   186 
       
   187 ; data = fm->SENSIBLE
       
   188   data = fm->FSH
       
   189   data_mod0(3,:,:,:) = data(:,:,:) 
       
   190   delete (data)
       
   191 end if
       
   192 
       
   193   data = fm->GPP
       
   194   data_mod0(4,:,:,:) = data(:,:,:) * factor 
       
   195   delete (data)
       
   196 
       
   197   if (model .eq. "cn") then
       
   198      data = fm->ER
       
   199   else
       
   200      data1 = fm->AR
       
   201      data2 = fm->HR
       
   202      data  = data1 + data2
       
   203     
       
   204      delete (data1)
       
   205      delete (data2)
       
   206   end if
       
   207 
       
   208   data_mod0(5,:,:,:) = data(:,:,:) * factor
       
   209   delete (data)
       
   210 
       
   211   delete (fm) 
       
   212 
       
   213 ;************************************************************
       
   214 ; interpolate model data into observed station
       
   215 ; note: model is 0-360E, 90S-90N
       
   216 ;************************************************************
       
   217 
       
   218 ; to be able to handle observation at (-89.98,-24.80)
       
   219   ym(0) = -90.  
       
   220 
       
   221   yy = linint2_points_Wrap(xm,ym,data_mod0,True,lon_ob(n),lat_ob(n),0)
       
   222 
       
   223 ; print (yy)
       
   224  
       
   225   data_mod(n,:,:) = yy(:,:,0)
       
   226 
       
   227   delete (yy)
       
   228 
       
   229  end do
       
   230 ;************************************************************
       
   231 ; compute correlation coef and M score
       
   232 ;************************************************************
       
   233 
       
   234  score_max = 5.
       
   235 
       
   236  ccr     = new ((/nstation, nfield/),float)
       
   237  M_score = new ((/nstation, nfield/),float) 
       
   238 
       
   239  do n=0,nstation-1
       
   240  do m=0,nfield-1   
       
   241     ccr(n,m) = esccr(data_ob(n,m,:),data_mod(n,m,:),0)
       
   242     bias = sum(abs(data_mod(n,m,:)-data_ob(n,m,:))/(abs(data_mod(n,m,:))+abs(data_ob(n,m,:))))
       
   243     M_score(n,m) = (1. -(bias/nmon)) * score_max
       
   244  end do
       
   245  end do
       
   246 
       
   247  M_co2 = avg(M_score(:,0))
       
   248  M_rad = avg(M_score(:,1))
       
   249  M_lh  = avg(M_score(:,2))
       
   250  M_sh  = avg(M_score(:,3))
       
   251  M_gpp = avg(M_score(:,4))
       
   252  M_er  = avg(M_score(:,5))
       
   253  M_all = M_co2+ M_rad +M_lh + M_sh + M_gpp + M_er
       
   254 
       
   255  M_energy_co2 = sprintf("%.2f", M_co2)
       
   256  M_energy_rad = sprintf("%.2f", M_rad)
       
   257  M_energy_lh  = sprintf("%.2f", M_lh )
       
   258  M_energy_sh  = sprintf("%.2f", M_sh )
       
   259  M_energy_gpp = sprintf("%.2f", M_gpp)
       
   260  M_energy_er  = sprintf("%.2f", M_er )
       
   261  M_energy_all = sprintf("%.2f", M_all)
       
   262 
       
   263 ;*******************************************************************
       
   264 ; for station line plot
       
   265 ;*******************************************************************
       
   266 
       
   267 ; for x-axis in xyplot
       
   268   mon = ispan(1,12,1)
       
   269   mon@long_name = "month"
       
   270 
       
   271   res                   = True               ; plot mods desired
       
   272   res@xyLineThicknesses = (/2.0,2.0/)        ; make 2nd lines thicker
       
   273   res@xyLineColors      = (/"blue","red"/)   ; line color (ob,model)
       
   274 ;-------------------------------------------------------------------------
       
   275 ; Add a boxed legend using the more simple method
       
   276 
       
   277   res@pmLegendDisplayMode    = "Always"
       
   278 ; res@pmLegendWidthF         = 0.1
       
   279   res@pmLegendWidthF         = 0.08
       
   280   res@pmLegendHeightF        = 0.06
       
   281 ; res@pmLegendOrthogonalPosF = -1.17
       
   282 ; res@pmLegendOrthogonalPosF = -1.00  ;(downward)
       
   283   res@pmLegendOrthogonalPosF = -0.30  ;(downward)
       
   284 
       
   285 ; res@pmLegendParallelPosF   =  0.18
       
   286   res@pmLegendParallelPosF   =  0.23  ;(rightward)
       
   287 
       
   288 ; res@lgPerimOn             = False
       
   289   res@lgLabelFontHeightF     = 0.015
       
   290   res@xyExplicitLegendLabels = (/"observed",model_name/)
       
   291 ;-------------------------------------------------------------------
       
   292 ; for panel plot
       
   293   res@gsnFrame     = False                   ; Do not draw plot 
       
   294   res@gsnDraw      = False                   ; Do not advance frame
       
   295 
       
   296   pres                            = True     ; panel plot mods desired
       
   297   pres@gsnPanelYWhiteSpacePercent = 5        ; increase white space around
       
   298                                              ; indiv. plots in panel
       
   299   pres@gsnMaximize                = True     ; fill the page
       
   300 ;-------------------------------------------------------------------
       
   301 
       
   302   plot_data   = new((/2,12/),float)
       
   303   plot_data!0 = "case"
       
   304   plot_data!1 = "month"
       
   305 
       
   306   do n = 0,nstation-1
       
   307 ;----------------------------
       
   308 ; for observed
       
   309 
       
   310     plot_name = station(n)+"_ob"    
       
   311     title = station(n)+"("+sprintf("%5.2f",lat_ob(n))+","+sprintf("%5.2f",lon_ob(n))+")"
       
   312     res@tiMainString = title
       
   313 
       
   314     wks = gsn_open_wks (plot_type,plot_name)
       
   315     plot=new(nfield,graphic)                        ; create graphic array   
       
   316                            
       
   317     plot_data(0,:) = (/data_ob (n,0,:)/)
       
   318     plot_data@long_name = field(0)   
       
   319     plot(0)=gsn_csm_xy(wks,mon,plot_data(0,:),res)   ; create plot 1
       
   320 
       
   321     plot_data(0,:) = (/data_ob (n,1,:)/)
       
   322     plot_data@long_name = field(1)
       
   323     plot(1)=gsn_csm_xy(wks,mon,plot_data(0,:),res)   ; create plot 2
       
   324 
       
   325     plot_data(0,:) = (/data_ob (n,2,:)/)
       
   326     plot_data@long_name = field(2)   
       
   327     plot(2)=gsn_csm_xy(wks,mon,plot_data(0,:),res)   ; create plot 3
       
   328 
       
   329     plot_data(0,:) = (/data_ob (n,3,:)/)
       
   330     plot_data@long_name = field(3)
       
   331     plot(3)=gsn_csm_xy(wks,mon,plot_data(0,:),res)   ; create plot 4
       
   332 
       
   333     plot_data(0,:) = (/data_ob (n,4,:)/)
       
   334     plot_data@long_name = field(4)
       
   335     plot(4)=gsn_csm_xy(wks,mon,plot_data(0,:),res)   ; create plot 5
       
   336 
       
   337     plot_data(0,:) = (/data_ob (n,5,:)/)
       
   338     plot_data@long_name = field(5)
       
   339     plot(5)=gsn_csm_xy(wks,mon,plot_data(0,:),res)   ; create plot 6
       
   340 
       
   341     gsn_panel(wks,plot,(/3,2/),pres)                 ; create panel plot
       
   342 
       
   343     system("convert "+plot_name+"."+plot_type+" "+plot_name+"."+plot_type_new+";"+ \
       
   344            "rm "+plot_name+"."+plot_type)
       
   345 
       
   346     clear (wks)  
       
   347     delete (plot)
       
   348 ;----------------------------
       
   349 ; for model_vs_ob
       
   350 
       
   351     plot_name = station(n)+"_model_vs_ob"
       
   352     title = station(n)+"("+sprintf("%5.2f",lat_ob(n))+","+sprintf("%5.2f",lon_ob(n))+")"    
       
   353     res@tiMainString = title
       
   354 
       
   355     wks = gsn_open_wks (plot_type,plot_name)
       
   356     plot=new(nfield,graphic)                        ; create graphic array   
       
   357                            
       
   358     plot_data(0,:) = (/data_ob (n,0,:)/)
       
   359     plot_data(1,:) = (/data_mod(n,0,:)/)
       
   360     plot_data@long_name = field(0)   
       
   361     plot(0)=gsn_csm_xy(wks,mon,plot_data,res)   ; create plot 1
       
   362 
       
   363     plot_data(0,:) = (/data_ob (n,1,:)/)
       
   364     plot_data(1,:) = (/data_mod(n,1,:)/)
       
   365     plot_data@long_name = field(1)
       
   366     plot(1)=gsn_csm_xy(wks,mon,plot_data,res)   ; create plot 2
       
   367 
       
   368     plot_data(0,:) = (/data_ob (n,2,:)/)
       
   369     plot_data(1,:) = (/data_mod(n,2,:)/)
       
   370     plot_data@long_name = field(2)   
       
   371     plot(2)=gsn_csm_xy(wks,mon,plot_data,res)   ; create plot 3
       
   372 
       
   373     plot_data(0,:) = (/data_ob (n,3,:)/)
       
   374     plot_data(1,:) = (/data_mod(n,3,:)/)
       
   375     plot_data@long_name = field(3)
       
   376     plot(3)=gsn_csm_xy(wks,mon,plot_data,res)   ; create plot 4
       
   377 
       
   378 
       
   379     plot_data(0,:) = (/data_ob (n,4,:)/)
       
   380     plot_data(1,:) = (/data_mod(n,4,:)/)
       
   381     plot_data@long_name = field(4)
       
   382     plot(4)=gsn_csm_xy(wks,mon,plot_data,res)   ; create plot 5
       
   383 
       
   384 
       
   385     plot_data(0,:) = (/data_ob (n,5,:)/)
       
   386     plot_data(1,:) = (/data_mod(n,5,:)/)
       
   387     plot_data@long_name = field(5)
       
   388     plot(5)=gsn_csm_xy(wks,mon,plot_data,res)   ; create plot 6
       
   389 
       
   390     gsn_panel(wks,plot,(/3,2/),pres)                 ; create panel plot
       
   391 
       
   392     system("convert "+plot_name+"."+plot_type+" "+plot_name+"."+plot_type_new+";"+ \
       
   393            "rm "+plot_name+"."+plot_type)
       
   394 
       
   395     clear (wks)  
       
   396     delete (plot)
       
   397  end do
       
   398 
       
   399 ;*******************************************************************
       
   400 ; html table of site: observed
       
   401 ;*******************************************************************
       
   402   output_html = "line_ob.html"
       
   403 
       
   404   header = (/"<HTML>" \
       
   405             ,"<HEAD>" \
       
   406             ,"<TITLE>CLAMP metrics</TITLE>" \
       
   407             ,"</HEAD>" \
       
   408             ,"<H1>Energy at Site: Observation</H1>" \
       
   409             /) 
       
   410   footer = "</HTML>"
       
   411 
       
   412   table_header = (/ \
       
   413         "<table border=1 cellspacing=0 cellpadding=3 width=60%>" \
       
   414        ,"<tr>" \
       
   415        ,"   <th bgcolor=DDDDDD >Site Name</th>" \
       
   416        ,"   <th bgcolor=DDDDDD >Latitude</th>" \
       
   417        ,"   <th bgcolor=DDDDDD >Longitude</th>" \
       
   418        ,"   <th bgcolor=DDDDDD >Observed</th>" \ 
       
   419        ,"</tr>" \
       
   420        /)
       
   421   table_footer = "</table>"
       
   422   row_header = "<tr>"
       
   423   row_footer = "</tr>"
       
   424 
       
   425   lines = new(50000,string)
       
   426   nline = 0
       
   427 
       
   428   set_line(lines,nline,header)
       
   429   set_line(lines,nline,table_header)
       
   430 ;-----------------------------------------------
       
   431 ; row of table
       
   432   
       
   433   do n = 0,nstation-1
       
   434      set_line(lines,nline,row_header)
       
   435 
       
   436      txt0 = station(n)
       
   437      txt1 = sprintf("%5.2f", lat_ob(n))
       
   438      txt2 = sprintf("%5.2f", lon_ob(n))
       
   439      txt3 = year_ob(n)
       
   440 
       
   441      set_line(lines,nline,"<th><a href="+txt0+"_ob.png>"+txt0+"</a></th>")
       
   442      set_line(lines,nline,"<th>"+txt1+"</th>")
       
   443      set_line(lines,nline,"<th>"+txt2+"</th>")
       
   444      set_line(lines,nline,"<th>"+txt3+"</th>")
       
   445 
       
   446      set_line(lines,nline,row_footer)
       
   447   end do
       
   448 ;-----------------------------------------------
       
   449   set_line(lines,nline,table_footer)
       
   450   set_line(lines,nline,footer) 
       
   451 
       
   452 ; Now write to an HTML file.
       
   453   idx = ind(.not.ismissing(lines))
       
   454   if(.not.any(ismissing(idx))) then
       
   455     asciiwrite(output_html,lines(idx))
       
   456   else
       
   457    print ("error?")
       
   458   end if
       
   459   delete (idx)
       
   460 
       
   461 ;*******************************************************************
       
   462 ; score and line table : model vs observed
       
   463 ;*******************************************************************
       
   464   output_html = "score+line_vs_ob.html"
       
   465 
       
   466   header = (/"<HTML>" \
       
   467             ,"<HEAD>" \
       
   468             ,"<TITLE>CLAMP metrics</TITLE>" \
       
   469             ,"</HEAD>" \
       
   470             ,"<H1>Energy at Site: Model "+model_name+"</H1>" \
       
   471             /) 
       
   472   footer = "</HTML>"
       
   473 
       
   474   delete (table_header)
       
   475   table_header = (/ \
       
   476         "<table border=1 cellspacing=0 cellpadding=3 width=100%>" \
       
   477        ,"<tr>" \
       
   478        ,"   <th bgcolor=DDDDDD >Site Name</th>" \
       
   479        ,"   <th bgcolor=DDDDDD >Latitude</th>" \
       
   480        ,"   <th bgcolor=DDDDDD >Longitude</th>" \
       
   481        ,"   <th bgcolor=DDDDDD >Observed</th>" \
       
   482        ,"   <th bgcolor=DDDDDD >CO2 Flux</th>" \
       
   483        ,"   <th bgcolor=DDDDDD >Net Radiation</th>" \
       
   484        ,"   <th bgcolor=DDDDDD >Latent Heat</th>" \
       
   485        ,"   <th bgcolor=DDDDDD >Sensible Heat</th>" \
       
   486        ,"   <th bgcolor=DDDDDD >GPP Glux</th>" \
       
   487        ,"   <th bgcolor=DDDDDD >Respiration</th>" \
       
   488        ,"   <th bgcolor=DDDDDD >Average</th>" \
       
   489        ,"</tr>" \
       
   490        /)
       
   491   table_footer = "</table>"
       
   492   row_header = "<tr>"
       
   493   row_footer = "</tr>"
       
   494 
       
   495   lines = new(50000,string)
       
   496   nline = 0
       
   497 
       
   498   set_line(lines,nline,header)
       
   499   set_line(lines,nline,table_header)
       
   500 ;-----------------------------------------------
       
   501 ; row of table
       
   502   
       
   503   do n = 0,nstation-1
       
   504      set_line(lines,nline,row_header)
       
   505 
       
   506      txt0  = station(n)
       
   507      txt1  = sprintf("%5.2f", lat_ob(n))
       
   508      txt2  = sprintf("%5.2f", lon_ob(n))
       
   509      txt3  = year_ob(n)
       
   510      txt4  = sprintf("%5.2f", M_score(n,0))
       
   511      txt5  = sprintf("%5.2f", M_score(n,1))
       
   512      txt6  = sprintf("%5.2f", M_score(n,2))
       
   513      txt7  = sprintf("%5.2f", M_score(n,3))
       
   514      txt8  = sprintf("%5.2f", M_score(n,4))
       
   515      txt9  = sprintf("%5.2f", M_score(n,5))
       
   516      txt10 = sprintf("%5.2f", avg(M_score(n,:)))
       
   517 
       
   518      set_line(lines,nline,"<th><a href="+txt0+"_model_vs_ob.png>"+txt0+"</a></th>")
       
   519      set_line(lines,nline,"<th>"+txt1+"</th>")
       
   520      set_line(lines,nline,"<th>"+txt2+"</th>")
       
   521      set_line(lines,nline,"<th>"+txt3+"</th>")
       
   522      set_line(lines,nline,"<th>"+txt4+"</th>")
       
   523      set_line(lines,nline,"<th>"+txt5+"</th>")
       
   524      set_line(lines,nline,"<th>"+txt6+"</th>")
       
   525      set_line(lines,nline,"<th>"+txt7+"</th>")
       
   526      set_line(lines,nline,"<th>"+txt8+"</th>")
       
   527      set_line(lines,nline,"<th>"+txt9+"</th>")
       
   528      set_line(lines,nline,"<th>"+txt10+"</th>")
       
   529 
       
   530      set_line(lines,nline,row_footer)
       
   531   end do
       
   532 
       
   533 ; last row, summary
       
   534   set_line(lines,nline,row_header)
       
   535 
       
   536   txt0  = "All_"+sprintf("%.0f", nstation)
       
   537   txt1  = "-"
       
   538   txt2  = "-"
       
   539   txt3  = "-"
       
   540   txt4  = M_energy_co2
       
   541   txt5  = M_energy_rad
       
   542   txt6  = M_energy_lh
       
   543   txt7  = M_energy_sh
       
   544   txt8  = M_energy_gpp
       
   545   txt9  = M_energy_er
       
   546   txt10 = M_energy_all
       
   547 
       
   548   set_line(lines,nline,"<th>"+txt0+"</th>")
       
   549   set_line(lines,nline,"<th>"+txt1+"</th>")
       
   550   set_line(lines,nline,"<th>"+txt2+"</th>")
       
   551   set_line(lines,nline,"<th>"+txt3+"</th>")
       
   552   set_line(lines,nline,"<th>"+txt4+"</th>")
       
   553   set_line(lines,nline,"<th>"+txt5+"</th>")
       
   554   set_line(lines,nline,"<th>"+txt6+"</th>")
       
   555   set_line(lines,nline,"<th>"+txt7+"</th>")
       
   556   set_line(lines,nline,"<th>"+txt8+"</th>")
       
   557   set_line(lines,nline,"<th>"+txt9+"</th>")
       
   558   set_line(lines,nline,"<th>"+txt10+"</th>")
       
   559 
       
   560   set_line(lines,nline,row_footer)
       
   561 ;-----------------------------------------------
       
   562   set_line(lines,nline,table_footer)
       
   563   set_line(lines,nline,footer) 
       
   564 
       
   565 ; Now write to an HTML file.
       
   566   idx = ind(.not.ismissing(lines))
       
   567   if(.not.any(ismissing(idx))) then
       
   568     asciiwrite(output_html,lines(idx))
       
   569   else
       
   570    print ("error?")
       
   571   end if
       
   572   delete (idx)
       
   573 
       
   574 ;***************************************************************************
       
   575 ; output plots
       
   576 ;***************************************************************************
       
   577   output_dir = model_name+"/ameriflux"
       
   578 
       
   579   system("mv *.png *.html " + output_dir) 
       
   580 ;***************************************************************************
       
   581 end