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1 ;************************************************************ |
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2 ; required command line input parameters: |
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3 ; ncl 'model_name="10cn" model_grid="T42" dirm="/.../ film="..."' 01.npp.ncl |
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4 ; |
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5 ; using gsn_table for all |
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6 ; output: line plot for each site (4 fields) |
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7 ; table for M_score |
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8 ;************************************************************ |
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9 load "$NCARG_ROOT/lib/ncarg/nclscripts/csm/gsn_code.ncl" |
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10 load "$NCARG_ROOT/lib/ncarg/nclscripts/csm/gsn_csm.ncl" |
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11 load "$NCARG_ROOT/lib/ncarg/nclscripts/csm/contributed.ncl" |
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12 ;************************************************************ |
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13 procedure set_line(lines:string,nline:integer,newlines:string) |
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14 begin |
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15 ; add line to ascci/html file |
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16 |
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17 nnewlines = dimsizes(newlines) |
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18 if(nline+nnewlines-1.ge.dimsizes(lines)) |
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19 print("set_line: bad index, not setting anything.") |
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20 return |
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21 end if |
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22 lines(nline:nline+nnewlines-1) = newlines |
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23 ; print ("lines = " + lines(nline:nline+nnewlines-1)) |
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24 nline = nline + nnewlines |
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25 return |
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26 end |
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27 ;************************************************************* |
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28 begin |
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29 |
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30 plot_type = "ps" |
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31 plot_type_new = "png" |
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32 |
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33 ;************************************************ |
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34 ; read model data |
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35 ;************************************************ |
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36 |
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37 ; from command line inputs |
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38 |
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39 ;-------------------------------------------------- |
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40 ; edit table.html of current model for movel1_vs_model2 |
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41 |
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42 if (isvar("compare")) then |
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43 html_name2 = compare+"/table.html" |
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44 html_new2 = html_name2 +".new" |
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45 |
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46 ; the following only needs to execute once |
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47 ; system("sed 1,/model_nameA/s//"+model_name+"/ "+html_name2+" > "+html_new2+";"+ \ |
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48 ; "mv -f "+html_new2+" "+html_name2+";"+ \ |
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49 ; "sed 1,/model_nameB/s//"+model_name+"/ "+html_name2+" > "+html_new2+";"+ \ |
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50 ; "mv -f "+html_new2+" "+html_name2+";"+ \ |
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51 ; "sed s#"+modeln+"#"+model_name+"# "+html_name2+" > "+html_new2+";"+ \ |
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52 ; "mv -f "+html_new2+" "+html_name2) |
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53 end if |
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54 |
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55 ;------------------------------------- |
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56 ; edit table.html for current model |
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57 |
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58 html_name = model_name+"/table.html" |
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59 html_new = html_name +".new" |
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60 |
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61 ; the following only needs to execute once |
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62 ; system("sed s#model_name#"+model_name+"# "+html_name+" > "+html_new+";"+ \ |
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63 ; "mv -f "+html_new+" "+html_name) |
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64 ;------------------------------------------------ |
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65 fm = addfile(dirm+film2,"r") |
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66 |
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67 xm = fm->lon |
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68 ym = fm->lat |
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69 ;------------------------------------------------ |
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70 nlat = dimsizes(ym) |
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71 nlon = dimsizes(xm) |
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72 |
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73 ; for 4 fields, 12-monthly |
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74 nmon = 12 |
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75 nfield = 4 |
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76 |
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77 data_mod0 = new ((/nfield,nmon,nlat,nlon/),float) |
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78 |
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79 ; change to unit of observed (u mol/m2/s) |
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80 ; Model_units [=] gC/m2/s |
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81 ; 12. = molecular weight of C |
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82 ; u mol = 1e-6 mol |
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83 factor = 1e6 /12. |
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84 |
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85 if (ENERGY .eq. "old") then |
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86 |
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87 data = fm->NEE |
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88 data_mod0(0,:,:,:) = data(:,:,:) * factor |
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89 delete (data) |
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90 |
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91 ; data = fm->LATENT |
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92 data1 = fm->FCEV |
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93 data2 = fm->FCTR |
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94 data3 = fm->FGEV |
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95 data_mod0(2,:,:,:) = data1(:,:,:)+data2(:,:,:)+data3(:,:,:) |
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96 delete (data1) |
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97 delete (data2) |
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98 delete (data3) |
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99 |
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100 ; data = fm->SENSIBLE |
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101 data = fm->FSH |
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102 data_mod0(3,:,:,:) = data(:,:,:) |
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103 delete (data) |
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104 |
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105 ; data = fm->NETRAD |
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106 data1 = fm->FSA |
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107 data2 = fm->FIRA |
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108 data_mod0(1,:,:,:) = data1(:,:,:)-data2(:,:,:)-data_mod0(2,:,:,:)-data_mod0(3,:,:,:) |
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109 delete (data1) |
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110 delete (data2) |
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111 |
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112 else |
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113 |
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114 data = fm->NEE |
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115 data_mod0(0,:,:,:) = data(:,:,:) * factor |
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116 delete (data) |
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117 |
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118 data = fm->NETRAD |
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119 data_mod0(1,:,:,:) = data(:,:,:) |
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120 delete (data) |
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121 |
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122 data = fm->LATENT |
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123 data_mod0(2,:,:,:) = data(:,:,:) |
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124 delete (data) |
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125 |
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126 data = fm->SENSIBLE |
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127 data_mod0(3,:,:,:) = data(:,:,:) |
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128 delete (data) |
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129 end if |
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130 |
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131 ;************************************************ |
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132 ; read data: observed |
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133 ;************************************************ |
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134 |
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135 station = (/"BOREAS_NSA_OBS" \ |
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136 ,"CastelPorziano" \ |
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137 ,"Hyytiala" \ |
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138 ,"Kaamanen" \ |
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139 ,"LBA_Tapajos_KM67" \ |
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140 ,"Lethbridge" \ |
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141 ,"Tharandt" \ |
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142 ,"Vielsalm" \ |
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143 /) |
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144 |
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145 year_ob = (/"1994-2004" \ |
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146 ,"1997-2003" \ |
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147 ,"1996-2003" \ |
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148 ,"2000-2003" \ |
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149 ,"2002-2005" \ |
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150 ,"1999-2004" \ |
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151 ,"1996-2003" \ |
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152 ,"1998-2003" \ |
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153 /) |
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154 |
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155 field = (/"CO2 Flux" \ |
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156 ,"Net Radiation" \ |
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157 ,"Latent Heat" \ |
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158 ,"Sensible Heat" \ |
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159 /) |
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160 |
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161 nstation = dimsizes(station) |
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162 nmon = 12 |
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163 nfield = dimsizes(field) |
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164 |
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165 data_ob = new ((/nstation, nfield, nmon/),float) |
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166 lat_ob = new ((/nstation/),float) |
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167 lon_ob = new ((/nstation/),float) |
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168 |
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169 diri_root = "/fis/cgd/cseg/people/jeff/clamp_data/fluxnet/" |
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170 |
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171 do n = 0,nstation-1 |
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172 diri = diri_root + station(n)+"/" |
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173 fili = station(n)+"_"+year_ob(n)+"_monthly.nc" |
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174 g = addfile (diri+fili,"r") |
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175 |
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176 lon_ob(n) = g->lon |
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177 lat_ob(n) = g->lat |
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178 |
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179 data = g->CO2_FLUX |
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180 data_ob(n,0,:) = dim_avg(data(month|:,year|:)) |
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181 delete (data) |
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182 |
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183 data = g->RAD_FLUX |
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184 data_ob(n,1,:) = dim_avg(data(month|:,year|:)) |
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185 delete (data) |
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186 |
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187 data = g->LH_FLUX |
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188 data_ob(n,2,:) = dim_avg(data(month|:,year|:)) |
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189 delete (data) |
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190 |
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191 data = g->SH_FLUX |
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192 data_ob(n,3,:) = dim_avg(data(month|:,year|:)) |
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193 delete (data) |
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194 |
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195 delete (g) |
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196 end do |
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197 |
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198 ;************************************************************ |
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199 ; interpolate model data into observed station |
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200 ; note: model is 0-360E, 90S-90N |
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201 ;************************************************************ |
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202 |
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203 ; to be able to handle observation at (-89.98,-24.80) |
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204 ym(0) = -90. |
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205 |
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206 yy = linint2_points_Wrap(xm,ym,data_mod0,True,lon_ob,lat_ob,0) |
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207 |
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208 delete (data_mod0) |
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209 yy!0 = "field" |
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210 data_mod = yy(pts|:,field|:,time|:) |
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211 |
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212 ;************************************************************ |
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213 ; compute correlation coef and M score |
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214 ;************************************************************ |
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215 |
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216 score_max = 5. |
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217 |
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218 ccr = new ((/nstation, nfield/),float) |
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219 M_score = new ((/nstation, nfield/),float) |
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220 |
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221 do n=0,nstation-1 |
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222 do m=0,nfield-1 |
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223 ccr(n,m) = esccr(data_ob(n,m,:),data_mod(n,m,:),0) |
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224 bias = sum(abs(data_mod(n,m,:)-data_ob(n,m,:))/(abs(data_mod(n,m,:))+abs(data_ob(n,m,:)))) |
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225 M_score(n,m) = (1. -(bias/nmon)) * score_max |
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226 end do |
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227 end do |
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228 |
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229 M_co2 = avg(M_score(:,0)) |
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230 M_rad = avg(M_score(:,1)) |
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231 M_lh = avg(M_score(:,2)) |
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232 M_sh = avg(M_score(:,3)) |
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233 M_all = M_co2+ M_rad +M_lh + M_sh |
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234 |
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235 M_energy_co2 = sprintf("%.2f", M_co2) |
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236 M_energy_rad = sprintf("%.2f", M_rad) |
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237 M_energy_lh = sprintf("%.2f", M_lh ) |
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238 M_energy_sh = sprintf("%.2f", M_sh ) |
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239 M_energy_all = sprintf("%.2f", M_all) |
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240 |
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241 ;******************************************************************* |
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242 ; for station line plot |
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243 ;******************************************************************* |
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244 |
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245 ; for x-axis in xyplot |
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246 mon = ispan(1,12,1) |
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247 mon@long_name = "month" |
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248 |
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249 res = True ; plot mods desired |
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250 res@xyLineThicknesses = (/2.0,2.0/) ; make 2nd lines thicker |
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251 res@xyLineColors = (/"blue","red"/) ; line color (ob,model) |
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252 ;------------------------------------------------------------------------- |
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253 ; Add a boxed legend using the more simple method |
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254 |
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255 res@pmLegendDisplayMode = "Always" |
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256 ; res@pmLegendWidthF = 0.1 |
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257 res@pmLegendWidthF = 0.08 |
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258 res@pmLegendHeightF = 0.06 |
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259 ; res@pmLegendOrthogonalPosF = -1.17 |
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260 ; res@pmLegendOrthogonalPosF = -1.00 ;(downward) |
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261 res@pmLegendOrthogonalPosF = -0.30 ;(downward) |
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262 |
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263 ; res@pmLegendParallelPosF = 0.18 |
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264 res@pmLegendParallelPosF = 0.23 ;(rightward) |
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265 |
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266 ; res@lgPerimOn = False |
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267 res@lgLabelFontHeightF = 0.015 |
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268 res@xyExplicitLegendLabels = (/"observed",model_name/) |
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269 ;------------------------------------------------------------------- |
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270 ; for panel plot |
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271 res@gsnFrame = False ; Do not draw plot |
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272 res@gsnDraw = False ; Do not advance frame |
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273 |
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274 pres = True ; panel plot mods desired |
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275 pres@gsnPanelYWhiteSpacePercent = 5 ; increase white space around |
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276 ; indiv. plots in panel |
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277 pres@gsnMaximize = True ; fill the page |
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278 ;------------------------------------------------------------------- |
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279 |
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280 plot_data = new((/2,12/),float) |
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281 plot_data!0 = "case" |
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282 plot_data!1 = "month" |
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283 |
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284 do n = 0,nstation-1 |
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285 ;---------------------------- |
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286 ; for observed |
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287 |
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288 plot_name = station(n)+"_ob" |
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289 title = station(n)+"("+sprintf("%5.2f",lat_ob(n))+","+sprintf("%5.2f",lon_ob(n))+")" |
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290 res@tiMainString = title |
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291 |
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292 wks = gsn_open_wks (plot_type,plot_name) |
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293 plot=new(4,graphic) ; create graphic array |
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294 |
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295 plot_data(0,:) = (/data_ob (n,0,:)/) |
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296 plot_data@long_name = field(0) |
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297 plot(0)=gsn_csm_xy(wks,mon,plot_data(0,:),res) ; create plot 1 |
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298 |
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299 plot_data(0,:) = (/data_ob (n,1,:)/) |
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300 plot_data@long_name = field(1) |
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301 plot(1)=gsn_csm_xy(wks,mon,plot_data(0,:),res) ; create plot 2 |
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302 |
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303 plot_data(0,:) = (/data_ob (n,2,:)/) |
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304 plot_data@long_name = field(2) |
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305 plot(2)=gsn_csm_xy(wks,mon,plot_data(0,:),res) ; create plot 3 |
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306 |
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307 plot_data(0,:) = (/data_ob (n,3,:)/) |
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308 plot_data@long_name = field(3) |
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309 plot(3)=gsn_csm_xy(wks,mon,plot_data(0,:),res) ; create plot 4 |
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310 |
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311 gsn_panel(wks,plot,(/2,2/),pres) ; create panel plot |
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312 |
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313 system("convert "+plot_name+"."+plot_type+" "+plot_name+"."+plot_type_new+";"+ \ |
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314 "rm "+plot_name+"."+plot_type) |
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315 |
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316 clear (wks) |
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317 delete (plot) |
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318 ;---------------------------- |
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319 ; for model_vs_ob |
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320 |
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321 plot_name = station(n)+"_model_vs_ob" |
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322 title = station(n)+"("+sprintf("%5.2f",lat_ob(n))+","+sprintf("%5.2f",lon_ob(n))+")" |
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323 res@tiMainString = title |
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324 |
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325 wks = gsn_open_wks (plot_type,plot_name) |
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326 plot=new(4,graphic) ; create graphic array |
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327 |
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328 plot_data(0,:) = (/data_ob (n,0,:)/) |
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329 plot_data(1,:) = (/data_mod(n,0,:)/) |
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330 plot_data@long_name = field(0) |
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331 plot(0)=gsn_csm_xy(wks,mon,plot_data,res) ; create plot 1 |
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332 |
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333 plot_data(0,:) = (/data_ob (n,1,:)/) |
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334 plot_data(1,:) = (/data_mod(n,1,:)/) |
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335 plot_data@long_name = field(1) |
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336 plot(1)=gsn_csm_xy(wks,mon,plot_data,res) ; create plot 2 |
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337 |
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338 plot_data(0,:) = (/data_ob (n,2,:)/) |
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339 plot_data(1,:) = (/data_mod(n,2,:)/) |
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340 plot_data@long_name = field(2) |
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341 plot(2)=gsn_csm_xy(wks,mon,plot_data,res) ; create plot 3 |
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342 |
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343 plot_data(0,:) = (/data_ob (n,3,:)/) |
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344 plot_data(1,:) = (/data_mod(n,3,:)/) |
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345 plot_data@long_name = field(3) |
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346 plot(3)=gsn_csm_xy(wks,mon,plot_data,res) ; create plot 4 |
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347 |
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348 gsn_panel(wks,plot,(/2,2/),pres) ; create panel plot |
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349 |
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350 system("convert "+plot_name+"."+plot_type+" "+plot_name+"."+plot_type_new+";"+ \ |
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351 "rm "+plot_name+"."+plot_type) |
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352 |
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353 clear (wks) |
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354 delete (plot) |
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355 end do |
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356 |
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357 ;******************************************************************* |
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358 ; html table of site: observed |
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359 ;******************************************************************* |
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360 output_html = "line_ob.html" |
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361 |
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362 header = (/"<HTML>" \ |
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363 ,"<HEAD>" \ |
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364 ,"<TITLE>CLAMP metrics</TITLE>" \ |
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365 ,"</HEAD>" \ |
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366 ,"<H1>Energy at Site: Observation</H1>" \ |
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367 /) |
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368 footer = "</HTML>" |
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369 |
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370 table_header = (/ \ |
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371 "<table border=1 cellspacing=0 cellpadding=3 width=60%>" \ |
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372 ,"<tr>" \ |
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373 ," <th bgcolor=DDDDDD >Site Name</th>" \ |
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374 ," <th bgcolor=DDDDDD >Latitude</th>" \ |
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375 ," <th bgcolor=DDDDDD >Longitude</th>" \ |
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376 ," <th bgcolor=DDDDDD >Observed</th>" \ |
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377 ,"</tr>" \ |
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378 /) |
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379 table_footer = "</table>" |
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380 row_header = "<tr>" |
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381 row_footer = "</tr>" |
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382 |
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383 lines = new(50000,string) |
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384 nline = 0 |
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385 |
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386 set_line(lines,nline,header) |
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387 set_line(lines,nline,table_header) |
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388 ;----------------------------------------------- |
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389 ; row of table |
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390 |
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391 do n = 0,nstation-1 |
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392 set_line(lines,nline,row_header) |
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393 |
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394 txt0 = station(n) |
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395 txt1 = sprintf("%5.2f", lat_ob(n)) |
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396 txt2 = sprintf("%5.2f", lon_ob(n)) |
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397 txt3 = year_ob(n) |
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398 |
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399 set_line(lines,nline,"<th><a href="+txt0+"_ob.png>"+txt0+"</a></th>") |
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400 set_line(lines,nline,"<th>"+txt1+"</th>") |
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401 set_line(lines,nline,"<th>"+txt2+"</th>") |
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402 set_line(lines,nline,"<th>"+txt3+"</th>") |
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403 |
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404 set_line(lines,nline,row_footer) |
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405 end do |
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406 ;----------------------------------------------- |
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407 set_line(lines,nline,table_footer) |
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408 set_line(lines,nline,footer) |
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409 |
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410 ; Now write to an HTML file. |
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411 idx = ind(.not.ismissing(lines)) |
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412 if(.not.any(ismissing(idx))) then |
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413 asciiwrite(output_html,lines(idx)) |
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414 else |
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415 print ("error?") |
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416 end if |
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417 delete (idx) |
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418 |
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419 ;******************************************************************* |
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420 ; score and line table : model vs observed |
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421 ;******************************************************************* |
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422 output_html = "score+line_vs_ob.html" |
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423 |
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424 header = (/"<HTML>" \ |
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425 ,"<HEAD>" \ |
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426 ,"<TITLE>CLAMP metrics</TITLE>" \ |
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427 ,"</HEAD>" \ |
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428 ,"<H1>Energy at Site: Model "+model_name+"</H1>" \ |
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429 /) |
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430 footer = "</HTML>" |
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431 |
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432 delete (table_header) |
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433 table_header = (/ \ |
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434 "<table border=1 cellspacing=0 cellpadding=3 width=100%>" \ |
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435 ,"<tr>" \ |
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436 ," <th bgcolor=DDDDDD >Site Name</th>" \ |
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437 ," <th bgcolor=DDDDDD >Latitude</th>" \ |
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438 ," <th bgcolor=DDDDDD >Longitude</th>" \ |
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439 ," <th bgcolor=DDDDDD >Observed</th>" \ |
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440 ," <th bgcolor=DDDDDD >CO2 Flux</th>" \ |
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441 ," <th bgcolor=DDDDDD >Net Radiation</th>" \ |
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442 ," <th bgcolor=DDDDDD >Latent Heat</th>" \ |
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443 ," <th bgcolor=DDDDDD >Sensible Heat</th>" \ |
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444 ," <th bgcolor=DDDDDD >Average</th>" \ |
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445 ,"</tr>" \ |
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446 /) |
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447 table_footer = "</table>" |
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448 row_header = "<tr>" |
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449 row_footer = "</tr>" |
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450 |
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451 lines = new(50000,string) |
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452 nline = 0 |
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453 |
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454 set_line(lines,nline,header) |
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455 set_line(lines,nline,table_header) |
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456 ;----------------------------------------------- |
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457 ; row of table |
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458 |
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459 do n = 0,nstation-1 |
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460 set_line(lines,nline,row_header) |
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461 |
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462 txt0 = station(n) |
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463 txt1 = sprintf("%5.2f", lat_ob(n)) |
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464 txt2 = sprintf("%5.2f", lon_ob(n)) |
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465 txt3 = year_ob(n) |
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466 txt4 = sprintf("%5.2f", M_score(n,0)) |
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467 txt5 = sprintf("%5.2f", M_score(n,1)) |
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468 txt6 = sprintf("%5.2f", M_score(n,2)) |
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469 txt7 = sprintf("%5.2f", M_score(n,3)) |
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470 txt8 = sprintf("%5.2f", avg(M_score(n,:))) |
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471 |
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472 set_line(lines,nline,"<th><a href="+txt0+"_model_vs_ob.png>"+txt0+"</a></th>") |
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473 set_line(lines,nline,"<th>"+txt1+"</th>") |
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474 set_line(lines,nline,"<th>"+txt2+"</th>") |
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475 set_line(lines,nline,"<th>"+txt3+"</th>") |
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476 set_line(lines,nline,"<th>"+txt4+"</th>") |
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477 set_line(lines,nline,"<th>"+txt5+"</th>") |
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478 set_line(lines,nline,"<th>"+txt6+"</th>") |
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479 set_line(lines,nline,"<th>"+txt7+"</th>") |
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480 set_line(lines,nline,"<th>"+txt8+"</th>") |
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481 |
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482 set_line(lines,nline,row_footer) |
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483 end do |
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484 |
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485 ; last row, summary |
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486 set_line(lines,nline,row_header) |
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487 |
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488 txt0 = "All_"+sprintf("%.0f", nstation) |
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489 txt1 = "-" |
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490 txt2 = "-" |
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491 txt3 = "-" |
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492 txt4 = M_energy_co2 |
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493 txt5 = M_energy_rad |
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494 txt6 = M_energy_lh |
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495 txt7 = M_energy_sh |
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496 txt8 = M_energy_all |
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497 |
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498 set_line(lines,nline,"<th>"+txt0+"</th>") |
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499 set_line(lines,nline,"<th>"+txt1+"</th>") |
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500 set_line(lines,nline,"<th>"+txt2+"</th>") |
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501 set_line(lines,nline,"<th>"+txt3+"</th>") |
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502 set_line(lines,nline,"<th>"+txt4+"</th>") |
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503 set_line(lines,nline,"<th>"+txt5+"</th>") |
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504 set_line(lines,nline,"<th>"+txt6+"</th>") |
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505 set_line(lines,nline,"<th>"+txt7+"</th>") |
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506 set_line(lines,nline,"<th>"+txt8+"</th>") |
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507 |
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508 set_line(lines,nline,row_footer) |
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509 ;----------------------------------------------- |
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510 set_line(lines,nline,table_footer) |
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511 set_line(lines,nline,footer) |
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512 |
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513 ; Now write to an HTML file. |
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514 idx = ind(.not.ismissing(lines)) |
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515 if(.not.any(ismissing(idx))) then |
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516 asciiwrite(output_html,lines(idx)) |
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517 else |
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518 print ("error?") |
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519 end if |
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520 delete (idx) |
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521 |
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522 ;************************************************************************************** |
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523 ; update score |
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524 ;************************************************************************************** |
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525 |
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526 if (isvar("compare")) then |
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527 system("sed 1,/M_energy_co2/s//"+M_energy_co2+"/ "+html_name2+" > "+html_new2+";"+ \ |
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528 "mv -f "+html_new2+" "+html_name2+";"+ \ |
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529 "sed 1,/M_energy_rad/s//"+M_energy_rad+"/ "+html_name2+" > "+html_new2+";"+ \ |
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530 "mv -f "+html_new2+" "+html_name2+";"+ \ |
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531 "sed 1,/M_energy_lh/s//"+M_energy_lh+"/ "+html_name2+" > "+html_new2+";"+ \ |
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532 "mv -f "+html_new2+" "+html_name2+";"+ \ |
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533 "sed 1,/M_energy_sh/s//"+M_energy_sh+"/ "+html_name2+" > "+html_new2+";"+ \ |
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534 "mv -f "+html_new2+" "+html_name2) |
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535 end if |
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536 |
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537 system("sed s#M_energy_co2#"+M_energy_co2+"# "+html_name+" > "+html_new+";"+ \ |
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538 "mv -f "+html_new+" "+html_name+";"+ \ |
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539 "sed s#M_energy_rad#"+M_energy_rad+"# "+html_name+" > "+html_new+";"+ \ |
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540 "mv -f "+html_new+" "+html_name+";"+ \ |
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541 "sed s#M_energy_lh#"+M_energy_lh+"# "+html_name+" > "+html_new+";"+ \ |
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542 "mv -f "+html_new+" "+html_name+";"+ \ |
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543 "sed s#M_energy_sh#"+M_energy_sh+"# "+html_name+" > "+html_new+";"+ \ |
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544 "mv -f "+html_new+" "+html_name) |
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545 |
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546 ;*************************************************************************** |
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547 ; output plots |
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548 ;*************************************************************************** |
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549 output_dir = model_name+"/energy" |
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550 |
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551 system("mv *.png *.html " + output_dir) |
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552 ;*************************************************************************** |
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553 end |