beta/04.biome.ncl
changeset 1 4be95183fbcd
equal deleted inserted replaced
-1:000000000000 0:8fd986540d19
       
     1 ;********************************************************
       
     2 ; required command line input parameters:
       
     3 ;  ncl 'model_name="10cn" model_grid="T42" dirm="/.../ film="..."' 01.npp.ncl
       
     4 ;
       
     5 ; histogram normalized by rain and compute correleration
       
     6 ;**************************************************************
       
     7 load "$NCARG_ROOT/lib/ncarg/nclscripts/csm/gsn_code.ncl.test"
       
     8 load "$NCARG_ROOT/lib/ncarg/nclscripts/csm/gsn_csm.ncl.test"
       
     9 load "$NCARG_ROOT/lib/ncarg/nclscripts/csm/contributed.ncl"
       
    10 ;**************************************************************
       
    11 procedure set_line(lines:string,nline:integer,newlines:string) 
       
    12 begin
       
    13 ; add line to ascci/html file
       
    14     
       
    15   nnewlines = dimsizes(newlines)
       
    16   if(nline+nnewlines-1.ge.dimsizes(lines))
       
    17     print("set_line: bad index, not setting anything.") 
       
    18     return
       
    19   end if 
       
    20   lines(nline:nline+nnewlines-1) = newlines
       
    21 ;  print ("lines = " + lines(nline:nline+nnewlines-1))
       
    22   nline = nline + nnewlines
       
    23   return 
       
    24 end
       
    25 ;**************************************************************
       
    26 ; Main code.
       
    27 begin
       
    28  
       
    29   nclass = 20
       
    30 
       
    31   plot_type     = "ps"
       
    32   plot_type_new = "png"
       
    33 ;************************************************
       
    34 ; read data: model       
       
    35 ;************************************************
       
    36  co2_i = 283.1878
       
    37  co2_f = 364.1252
       
    38 
       
    39  model_grid = "T42"
       
    40 
       
    41 ;model_name_i = "i01.07cn"
       
    42 ;model_name_f = "i01.10cn"
       
    43 
       
    44  model_name_i = "i01.07casa"
       
    45  model_name_f = "i01.10casa"
       
    46 
       
    47  model_name = model_name_f
       
    48 
       
    49  dirm = "/fis/cgd/cseg/people/jeff/clamp_data/model/"
       
    50  film_i = model_name_i + "_1990-2004_ANN_climo.nc"
       
    51  film_f = model_name_f + "_1990-2004_ANN_climo.nc"
       
    52 
       
    53  fm_i   = addfile (dirm+film_i,"r")
       
    54  fm_f   = addfile (dirm+film_f,"r")
       
    55   
       
    56  npp_i  = fm_i->NPP
       
    57  npp_f  = fm_f->NPP
       
    58       
       
    59 ;************************************************
       
    60 ; read data: observed
       
    61 ;************************************************
       
    62 
       
    63   ob_name = "MODIS MOD 15A2 2000-2005"
       
    64 
       
    65   diro  = "/fis/cgd/cseg/people/jeff/clamp_data/lai/ob/"
       
    66   filo  = "land_class_"+model_grid+".nc"
       
    67 
       
    68   fo = addfile(diro+filo,"r")
       
    69  
       
    70   classob = tofloat(fo->LAND_CLASS)                
       
    71 
       
    72 ;*******************************************************************
       
    73 ; Calculate "nice" bins for binning the data in equally spaced ranges
       
    74 ;********************************************************************
       
    75   nclassn     = nclass + 1
       
    76   range       = fspan(0,nclassn-1,nclassn)
       
    77 ; print (range)
       
    78 
       
    79 ; Use this range information to grab all the values in a
       
    80 ; particular range, and then take an average.
       
    81 
       
    82   nr           = dimsizes(range)
       
    83   nx           = nr-1
       
    84   xvalues      = new((/2,nx/),float)
       
    85   xvalues(0,:) = range(0:nr-2) + (range(1:)-range(0:nr-2))/2.
       
    86   dx           = xvalues(0,1) - xvalues(0,0)       ; range width
       
    87   dx4          = dx/4                              ; 1/4 of the range
       
    88   xvalues(1,:) = xvalues(0,:) - dx/5.
       
    89 
       
    90 ; get data
       
    91 
       
    92   DATA11_1D = ndtooned(classob)
       
    93   DATA12_1D = ndtooned(npp_i)
       
    94   DATA22_1D = ndtooned(npp_f)
       
    95 
       
    96   yvalues      = new((/2,nx/),float)
       
    97   mn_yvalues   = new((/2,nx/),float)
       
    98   mx_yvalues   = new((/2,nx/),float)
       
    99 
       
   100   do nd=0,1
       
   101 
       
   102 ; See if we are doing model or observational data.
       
   103 
       
   104     if(nd.eq.0) then
       
   105       data_ob  = DATA11_1D
       
   106       data_mod = DATA12_1D
       
   107     else
       
   108       data_ob  = DATA11_1D
       
   109       data_mod = DATA22_1D
       
   110     end if
       
   111 
       
   112 ; Loop through each range and check for values.
       
   113 
       
   114     do i=0,nr-2
       
   115       if (i.ne.(nr-2)) then
       
   116 ;        print("")
       
   117 ;        print("In range ["+range(i)+","+range(i+1)+")")
       
   118          idx = ind((data_ob.ge.range(i)).and.(data_ob.lt.range(i+1)))
       
   119       else
       
   120 ;        print("")
       
   121 ;        print("In range ["+range(i)+",)")
       
   122          idx = ind(data_ob.ge.range(i))
       
   123       end if
       
   124 
       
   125 ; Calculate average, and get min and max.
       
   126 
       
   127       if(.not.any(ismissing(idx))) then
       
   128         yvalues(nd,i)    = avg(data_mod(idx))
       
   129         mn_yvalues(nd,i) = min(data_mod(idx))
       
   130         mx_yvalues(nd,i) = max(data_mod(idx))
       
   131         count = dimsizes(idx)
       
   132       else
       
   133         count            = 0
       
   134         yvalues(nd,i)    = yvalues@_FillValue
       
   135         mn_yvalues(nd,i) = yvalues@_FillValue
       
   136         mx_yvalues(nd,i) = yvalues@_FillValue
       
   137       end if
       
   138 
       
   139 ;     print(nd + ": " + count + " points, avg = " + yvalues(nd,i))
       
   140 ;     print("Min/Max:  " + mn_yvalues(nd,i) + "/" + mx_yvalues(nd,i))
       
   141 
       
   142 ; Clean up for next time in loop.
       
   143 
       
   144       delete(idx)
       
   145     end do
       
   146     delete(data_ob)
       
   147     delete(data_mod)
       
   148   end do
       
   149 ;============================
       
   150 ;compute beta
       
   151 ;============================
       
   152 
       
   153  nsec_per_year = 60*60*24*365
       
   154 
       
   155  u = yvalues(0,:)
       
   156  v = yvalues(1,:)
       
   157 
       
   158  good = ind(.not.ismissing(u) .and. .not.ismissing(v))
       
   159  uu = u(good)* nsec_per_year 
       
   160  vv = v(good)* nsec_per_year 
       
   161 
       
   162  n_biome = dimsizes(uu)
       
   163 
       
   164  beta_biome = new((/n_biome/),float)
       
   165 
       
   166  beta_biome = ((vv/uu) - 1.)/log(co2_f/co2_i)
       
   167 
       
   168  beta_biome_avg = avg(beta_biome)
       
   169   
       
   170  print (beta_biome_avg)
       
   171 ;*******************************************************************
       
   172 ; for html table
       
   173 ;*******************************************************************
       
   174 
       
   175 ; column (not including header column)
       
   176 
       
   177   col_head = (/"CO2_i","CO2_f","NPP_i","NPP_f","Beta"/)
       
   178 
       
   179   ncol = dimsizes(col_head)
       
   180 
       
   181 ; row (not including header row)
       
   182   row_head  = (/"Water Bodies" \
       
   183                ,"Evergreen Needleleaf Forests" \
       
   184                ,"Evergreen Broadleaf Forests" \
       
   185                ,"Deciduous Needleleaf Forest" \
       
   186                ,"Deciduous Broadleaf Forests" \
       
   187                ,"Mixed Forests" \                      
       
   188                ,"Closed Bushlands" \                   
       
   189                ,"Open Bushlands" \                     
       
   190                ,"Woody Savannas (S. Hem.)" \           
       
   191                ,"Savannas (S. Hem.)" \                 
       
   192                ,"Grasslands" \                         
       
   193                ,"Permanent Wetlands" \                 
       
   194                ,"Croplands" \                                           
       
   195                ,"Cropland/Natural Vegetation Mosaic" \ 
       
   196                ,"Permanent Snow and Ice" \             
       
   197                ,"Barren or Sparsely Vegetated" \                             
       
   198                ,"Woody Savannas (N. Hem.)" \           
       
   199                ,"Savannas (N. Hem.)" \
       
   200                ,"All Biome" \                
       
   201                /)  
       
   202   nrow = dimsizes(row_head)                  
       
   203 
       
   204 ; arrays to be passed to table. 
       
   205   text4 = new ((/nrow, ncol/),string )
       
   206 
       
   207  do i=0,nrow-2
       
   208   text4(i,0) = sprintf("%.2f",co2_i)
       
   209   text4(i,1) = sprintf("%.2f",co2_f)
       
   210   text4(i,2) = sprintf("%.2f",uu(i))
       
   211   text4(i,3) = sprintf("%.2f",vv(i))
       
   212   text4(i,4) = sprintf("%.2f",beta_biome(i))
       
   213  end do
       
   214   text4(nrow-1,0) = "-"
       
   215   text4(nrow-1,1) = "-"
       
   216   text4(nrow-1,2) = "-"
       
   217   text4(nrow-1,3) = "-"
       
   218   text4(nrow-1,4) = sprintf("%.2f",beta_biome_avg)
       
   219 
       
   220 ;**************************************************
       
   221 ; html table
       
   222 ;**************************************************
       
   223   output_html = "table_biome.html"
       
   224 
       
   225   header_text = "<H1>Beta Factor: Model "+model_name+"</H1>" 
       
   226 
       
   227   header = (/"<HTML>" \
       
   228             ,"<HEAD>" \
       
   229             ,"<TITLE>CLAMP metrics</TITLE>" \
       
   230             ,"</HEAD>" \
       
   231             ,header_text \
       
   232             /) 
       
   233   footer = "</HTML>"
       
   234 
       
   235   table_header = (/ \
       
   236         "<table border=1 cellspacing=0 cellpadding=3 width=60%>" \
       
   237        ,"<tr>" \
       
   238        ,"   <th bgcolor=DDDDDD >Biome Class</th>" \
       
   239        ,"   <th bgcolor=DDDDDD >CO2_i</th>" \
       
   240        ,"   <th bgcolor=DDDDDD >CO2_f</th>" \
       
   241        ,"   <th bgcolor=DDDDDD >NPP_i</th>" \
       
   242        ,"   <th bgcolor=DDDDDD >NPP_f</th>" \
       
   243        ,"   <th bgcolor=DDDDDD >Beta</th>" \
       
   244        ,"</tr>" \
       
   245        /)
       
   246   table_footer = "</table>"
       
   247   row_header = "<tr>"
       
   248   row_footer = "</tr>"
       
   249 
       
   250   lines = new(50000,string)
       
   251   nline = 0
       
   252 
       
   253   set_line(lines,nline,header)
       
   254   set_line(lines,nline,table_header)
       
   255 ;-----------------------------------------------
       
   256 ;row of table
       
   257 
       
   258   do n = 0,nrow-1
       
   259      set_line(lines,nline,row_header)
       
   260 
       
   261      txt1  = row_head(n)
       
   262      txt2  = text4(n,0)
       
   263      txt3  = text4(n,1)
       
   264      txt4  = text4(n,2)
       
   265      txt5  = text4(n,3)
       
   266      txt6  = text4(n,4)
       
   267 
       
   268      set_line(lines,nline,"<th>"+txt1+"</th>")
       
   269      set_line(lines,nline,"<th>"+txt2+"</th>")
       
   270      set_line(lines,nline,"<th>"+txt3+"</th>")
       
   271      set_line(lines,nline,"<th>"+txt4+"</th>")
       
   272      set_line(lines,nline,"<th>"+txt5+"</th>")
       
   273      set_line(lines,nline,"<th>"+txt6+"</th>")
       
   274 
       
   275      set_line(lines,nline,row_footer)
       
   276   end do
       
   277 ;-----------------------------------------------
       
   278   set_line(lines,nline,table_footer)
       
   279   set_line(lines,nline,footer) 
       
   280 
       
   281 ; Now write to an HTML file.
       
   282   idx = ind(.not.ismissing(lines))
       
   283   if(.not.any(ismissing(idx))) then
       
   284     asciiwrite(output_html,lines(idx))
       
   285   else
       
   286    print ("error?")
       
   287   end if
       
   288 
       
   289 end
       
   290