ameriflux/13.plot.ncl
author Forrest Hoffman <forrest@climatemodeling.org>
Mon, 26 Jan 2009 22:08:20 -0500
changeset 0 0c6405ab2ff4
permissions -rw-r--r--
Initial commit of C-LAMP Diagnostics from Jeff Lee
     1 ;************************************************************
     2 ; change long_name
     3 ;************************************************************
     4 load "$NCARG_ROOT/lib/ncarg/nclscripts/csm/gsn_code.ncl"
     5 load "$NCARG_ROOT/lib/ncarg/nclscripts/csm/gsn_csm.ncl"
     6 load "$NCARG_ROOT/lib/ncarg/nclscripts/csm/contributed.ncl"
     7 ;************************************************************
     8 procedure set_line(lines:string,nline:integer,newlines:string) 
     9 begin
    10 ; add line to ascci/html file
    11     
    12   nnewlines = dimsizes(newlines)
    13   if(nline+nnewlines-1.ge.dimsizes(lines))
    14     print("set_line: bad index, not setting anything.") 
    15     return
    16   end if 
    17   lines(nline:nline+nnewlines-1) = newlines
    18 ;  print ("lines = " + lines(nline:nline+nnewlines-1))
    19   nline = nline + nnewlines
    20   return 
    21 end
    22 ;*************************************************************
    23 begin
    24 
    25   plot_type     = "ps"
    26   plot_type_new = "png"
    27 
    28 ; for 6 fields, 12-monthly
    29   nmon      = 12
    30   nfield    = 6
    31 
    32 ;************************************************
    33 ; read model data
    34 ;************************************************
    35   model = "cn"
    36 ; model = "casa"
    37   
    38   model_name = "i01.10" + model
    39 
    40   dirm  = "/fis/cgd/cseg/people/jeff/surface_data/"
    41   film  = "lnd_T42.nc"
    42   fm    = addfile(dirm+film,"r")
    43   
    44   xm    = fm->lon
    45   ym    = fm->lat
    46 ;------------------------------------------------
    47   nlat = dimsizes(ym)
    48   nlon = dimsizes(xm)
    49 
    50   data_mod0 = new ((/nfield,nmon,nlat,nlon/),float)
    51 
    52 ; change to unit of observed (u mol/m2/s)
    53 ; Model_units [=] gC/m2/s
    54 ; 12. = molecular weight of C
    55 ; u mol = 1e-6 mol
    56   factor = 1e6 /12.
    57 
    58   ENERGY ="new"
    59 
    60 ;************************************************
    61 ; read data: observed
    62 ;************************************************
    63 
    64  station = (/"ARM_Oklahoma" \
    65             ,"ARM_Oklahoma_burn" \
    66             ,"ARM_Oklahoma_control" \
    67             ,"Atqasuk" \
    68             ,"Audubon" \
    69             ,"AustinCary" \
    70             ,"Bartlett" \
    71             ,"Bondville" \
    72             ,"Brookings" \
    73             ,"Donaldson" \
    74             ,"Duke_Forest_Hardwoods" \
    75             ,"Duke_Forest_Open_Field" \
    76             ,"Duke_Forest_Pine" \
    77             ,"Fermi_Ag" \
    78             ,"Fermi_Prairie" \
    79             ,"Flagstaff_Managed" \
    80             ,"Flagstaff_Unmanaged" \
    81             ,"Flagstaff_Wildfire" \
    82             ,"FortPeck" \
    83             ,"FreemanRanch_mesquite" \
    84             ,"Goodwin_Creek" \
    85             ,"HarvardForest" \
    86             ,"HarvardForestHemlock" \
    87             ,"HowlandForestMain" \
    88             ,"HowlandForestWest" \
    89             ,"Ivotuk" \
    90             ,"KendallGrasslands" \
    91             ,"KennedySpaceCenterPine" \
    92             ,"KennedySpaceCenterScrub" \
    93             ,"LittleProspect" \
    94             ,"LostCreek" \
    95             ,"Mead-irrigated" \
    96             ,"Mead-irrigated-rotation" \
    97             ,"Mead-rainfed" \
    98             ,"Metolius_2nd_YoungPonderosaPine" \
    99             ,"MetoliusEyerly" \
   100             ,"MetoliusIntermediatePine" \
   101             ,"MetoliusOldPonderosaPine" \
   102             ,"MissouriOzark" \
   103             ,"Mize" \
   104             ,"MorganMonroe" \
   105             ,"NiwotRidge" \
   106             ,"NorthCarolina_cc" \
   107             ,"NorthCarolina_lp" \
   108             ,"ParkFalls" \
   109             ,"Rayonier" \
   110             ,"SantaRita" \
   111             ,"SkyOaks_Old" \
   112             ,"SkyOaks_PostFire" \
   113             ,"SkyOaks_Young" \
   114             ,"SylvaniaWilderness" \
   115             ,"Toledo" \
   116             ,"Tonzi" \
   117             ,"UCI_1850" \
   118             ,"UCI_1930" \
   119             ,"UCI_1964" \
   120             ,"UCI_1964wet" \
   121             ,"UCI_1981" \
   122             ,"UCI_1989" \
   123             ,"UCI_1998" \
   124             ,"UMBS" \
   125             ,"Vaira" \
   126             ,"WalkerBranch" \
   127             ,"WillowCreek" \
   128             ,"WindRiver" \
   129             ,"Wisconsin_ihw" \
   130             ,"Wisconsin_irp" \
   131             ,"Wisconsin_mrp" \
   132             ,"Wisconsin_myjp" \
   133             ,"Wisconsin_pb" \
   134             ,"Wisconsin_rpcc" \
   135             ,"Wisconsin_yhw" \
   136             ,"Wisconsin_yjp" \
   137             ,"Wisconsin_yrp" \
   138             /)
   139 
   140  year_ob = (/"2003-2006" \
   141             ,"2005-2006" \
   142             ,"2005-2006" \
   143             ,"1999-2006" \
   144             ,"2002-2006" \
   145             ,"2000-2005" \
   146             ,"2004-2005" \
   147             ,"1996-2006" \
   148             ,"2004-2006" \
   149             ,"1999-2004" \
   150             ,"2003-2005" \
   151             ,"2001-2005" \
   152             ,"2001-2005" \
   153             ,"2005-2006" \
   154             ,"2004-2006" \
   155             ,"2005-2006" \
   156             ,"2005-2006" \
   157             ,"2005-2006" \
   158             ,"2000-2006" \
   159             ,"2004-2006" \
   160             ,"2002-2006" \
   161             ,"1991-2004" \
   162             ,"2004-2004" \
   163             ,"1996-2004" \
   164             ,"1999-2004" \
   165             ,"2003-2006" \
   166             ,"2004-2006" \
   167             ,"2002-2002" \
   168             ,"2000-2006" \
   169             ,"2002-2005" \
   170             ,"2001-2005" \
   171             ,"2001-2005" \
   172             ,"2001-2005" \
   173             ,"2001-2005" \
   174             ,"2004-2005" \
   175             ,"2004-2005" \
   176             ,"2003-2005" \
   177             ,"1996-2000" \
   178             ,"2004-2006" \
   179             ,"1998-2004" \
   180             ,"1999-2005" \
   181             ,"1999-2003" \
   182             ,"2005-2006" \
   183             ,"2005-2006" \
   184             ,"1996-2003" \
   185             ,"1998-1998" \
   186             ,"2004-2006" \
   187             ,"1997-2006" \
   188             ,"2004-2006" \
   189             ,"1997-2006" \
   190             ,"2002-2006" \
   191             ,"2004-2005" \
   192             ,"2001-2006" \
   193             ,"2004-2005" \
   194             ,"2001-2005" \
   195             ,"2001-2005" \
   196             ,"2002-2004" \
   197             ,"2001-2005" \
   198             ,"2001-2005" \
   199             ,"2002-2005" \
   200             ,"1999-2003" \
   201             ,"2001-2006" \
   202             ,"1995-1999" \
   203             ,"1999-2005" \
   204             ,"1999-2004" \
   205             ,"2003-2003" \
   206             ,"2003-2003" \
   207             ,"2002-2005" \
   208             ,"2004-2004" \
   209             ,"2002-2002" \
   210             ,"2005-2005" \
   211             ,"2002-2002" \
   212             ,"2004-2005" \
   213             ,"2002-2002" \
   214             /)
   215 
   216  field   = (/"NEE Flux" \
   217             ,"Net Radiation" \
   218             ,"Latent Heat" \
   219             ,"Sensible Heat" \
   220             ,"GPP Flux" \
   221             ,"Respiration" \
   222             /)
   223 
   224  field_unit = (/"u mol/m2/s" \
   225                ,"W/m2" \
   226                ,"W/m2" \
   227                ,"W/m2" \
   228                ,"u mol/m2/s" \
   229                ,"u mol/m2/s" \
   230                /)
   231 
   232  nstation  = dimsizes(station)
   233 
   234  data_mod  = new ((/nstation, nfield, nmon/),float)
   235  data_ob   = new ((/nstation, nfield, nmon/),float)
   236  lat_ob    = new ((/nstation/),float)
   237  lon_ob    = new ((/nstation/),float)
   238  unit_ob   = new ((/nfield/),string)
   239 
   240  diro_root  = "/fis/cgd/cseg/people/jeff/clamp/ameriflux/data/"
   241  dirm_root  = "/fis/cgd/cseg/people/jeff/clamp_data/model/"
   242 
   243  do n = 0,nstation-1
   244 
   245 ;-------------------------------------------------
   246 ;   get ob data
   247 
   248     diro = diro_root + station(n)+"/"
   249     filo = year_ob(n)+"_L4_m.nc"
   250     fo   = addfile (diro+filo,"r")
   251 
   252     print (filo)
   253  
   254     lon_ob(n) = fo->lon 
   255     lat_ob(n) = fo->lat
   256 
   257     data      = fo->NEE_or_fMDS
   258     data_ob(n,0,:) = dim_avg(data(month|:,year|:))
   259     delete (data)
   260 
   261     data      = fo->Rg_f
   262     data_ob(n,1,:) = dim_avg(data(month|:,year|:))
   263     delete (data)
   264 
   265     data      = fo->LE_f
   266     data_ob(n,2,:) = dim_avg(data(month|:,year|:))
   267     delete (data)
   268 
   269     data      = fo->H_f
   270     data_ob(n,3,:) = dim_avg(data(month|:,year|:))
   271     delete (data)
   272 
   273     data      = fo->GPP_or_MDS
   274     data_ob(n,4,:) = dim_avg(data(month|:,year|:))
   275     delete (data)
   276 
   277     data      = fo->Reco_or
   278     data_ob(n,5,:) = dim_avg(data(month|:,year|:))
   279     delete (data)
   280 
   281     delete (fo)
   282 ;---------------------------------------------------
   283 ;   get model data
   284 
   285 ;   film = model_name+"_"+ year_ob(n)+"_MONS_climo.nc"
   286     film = model_name+"_"+"1990-2004"+"_MONS_climo.nc"
   287     fm   = addfile (dirm_root+film,"r")
   288 
   289     print (film)
   290 
   291 if (ENERGY .eq. "old") then
   292 
   293   data = fm->NEE
   294   data_mod0(0,:,:,:) = data(:,:,:) * factor
   295   delete (data)
   296 
   297 ; data  = fm->LATENT
   298   data1 = fm->FCEV
   299   data2 = fm->FCTR
   300   data3 = fm->FGEV
   301   data_mod0(2,:,:,:) = data1(:,:,:)+data2(:,:,:)+data3(:,:,:) 
   302   delete (data1)
   303   delete (data2)
   304   delete (data3)
   305 
   306 ; data = fm->SENSIBLE
   307   data  = fm->FSH
   308   data_mod0(3,:,:,:) = data(:,:,:) 
   309   delete (data)
   310 
   311 ; data  = fm->NETRAD
   312   data1 = fm->FSA
   313   data2 = fm->FIRA
   314   data_mod0(1,:,:,:) = data1(:,:,:)-data2(:,:,:)-data_mod0(2,:,:,:)-data_mod0(3,:,:,:) 
   315   delete (data1)
   316   delete (data2)
   317 
   318 else
   319 
   320   data = fm->NEE
   321   data_mod0(0,:,:,:) = data(:,:,:) * factor
   322   delete (data)
   323 
   324   data = fm->NETRAD
   325   data_mod0(1,:,:,:) = data(:,:,:) 
   326   delete (data)
   327 
   328   data = fm->LATENT
   329   data_mod0(2,:,:,:) = data(:,:,:) 
   330   delete (data)
   331 
   332 ; data = fm->SENSIBLE
   333   data = fm->FSH
   334   data_mod0(3,:,:,:) = data(:,:,:) 
   335   delete (data)
   336 end if
   337 
   338   data = fm->GPP
   339   data_mod0(4,:,:,:) = data(:,:,:) * factor 
   340   delete (data)
   341 
   342   if (model .eq. "cn") then
   343      data = fm->ER
   344   else
   345      data1 = fm->AR
   346      data2 = fm->HR
   347      data  = data1 + data2
   348     
   349      delete (data1)
   350      delete (data2)
   351   end if
   352 
   353   data_mod0(5,:,:,:) = data(:,:,:) * factor
   354   delete (data)
   355 
   356   delete (fm) 
   357 
   358 ;************************************************************
   359 ; interpolate model data into observed station
   360 ; note: model is 0-360E, 90S-90N
   361 ;************************************************************
   362 
   363 ; to be able to handle observation at (-89.98,-24.80)
   364   ym(0) = -90.  
   365 
   366   yy = linint2_points_Wrap(xm,ym,data_mod0,True,lon_ob(n),lat_ob(n),0)
   367 
   368 ; print (yy)
   369  
   370   data_mod(n,:,:) = yy(:,:,0)
   371 
   372   delete (yy)
   373 
   374  end do
   375 ;************************************************************
   376 ; compute correlation coef and M score
   377 ;************************************************************
   378 
   379  score_max = 5.
   380 
   381  ccr     = new ((/nstation, nfield/),float)
   382  M_score = new ((/nstation, nfield/),float) 
   383 
   384  do n=0,nstation-1
   385  do m=0,nfield-1   
   386     ccr(n,m) = esccr(data_ob(n,m,:),data_mod(n,m,:),0)
   387     bias = sum(abs(data_mod(n,m,:)-data_ob(n,m,:))/(abs(data_mod(n,m,:))+abs(data_ob(n,m,:))))
   388     M_score(n,m) = (1. -(bias/nmon)) * score_max
   389  end do
   390  end do
   391 
   392  M_co2 = avg(M_score(:,0))
   393  M_rad = avg(M_score(:,1))
   394  M_lh  = avg(M_score(:,2))
   395  M_sh  = avg(M_score(:,3))
   396  M_gpp = avg(M_score(:,4))
   397  M_er  = avg(M_score(:,5))
   398  M_all = M_co2+ M_rad +M_lh + M_sh + M_gpp + M_er
   399 
   400  M_energy_co2 = sprintf("%.2f", M_co2)
   401  M_energy_rad = sprintf("%.2f", M_rad)
   402  M_energy_lh  = sprintf("%.2f", M_lh )
   403  M_energy_sh  = sprintf("%.2f", M_sh )
   404  M_energy_gpp = sprintf("%.2f", M_gpp)
   405  M_energy_er  = sprintf("%.2f", M_er )
   406  M_energy_all = sprintf("%.2f", M_all)
   407 
   408 ;*******************************************************************
   409 ; for station line plot
   410 ;*******************************************************************
   411 
   412 ; for x-axis in xyplot
   413   mon = ispan(1,12,1)
   414   mon@long_name = "month"
   415 
   416   res                   = True               ; plot mods desired
   417   res@xyLineThicknesses = (/2.0,2.0/)        ; make 2nd lines thicker
   418   res@xyLineColors      = (/"blue","red"/)   ; line color (ob,model)
   419 ;-------------------------------------------------------------------------
   420 ; Add a boxed legend using the more simple method
   421 
   422   res@pmLegendDisplayMode    = "Always"
   423 ; res@pmLegendWidthF         = 0.1
   424   res@pmLegendWidthF         = 0.08
   425   res@pmLegendHeightF        = 0.06
   426 ; res@pmLegendOrthogonalPosF = -1.17
   427 ; res@pmLegendOrthogonalPosF = -1.00  ;(downward)
   428   res@pmLegendOrthogonalPosF = -0.30  ;(downward)
   429 
   430 ; res@pmLegendParallelPosF   =  0.18
   431   res@pmLegendParallelPosF   =  0.23  ;(rightward)
   432 
   433 ; res@lgPerimOn             = False
   434   res@lgLabelFontHeightF     = 0.015
   435   res@xyExplicitLegendLabels = (/"observed",model_name/)
   436 ;-------------------------------------------------------------------
   437 ; for panel plot
   438   res@gsnFrame     = False                   ; Do not draw plot 
   439   res@gsnDraw      = False                   ; Do not advance frame
   440 
   441   pres                            = True     ; panel plot mods desired
   442   pres@gsnPanelYWhiteSpacePercent = 5        ; increase white space around
   443                                              ; indiv. plots in panel
   444   pres@gsnMaximize                = True     ; fill the page
   445 ;-------------------------------------------------------------------
   446 
   447   plot_data   = new((/2,12/),float)
   448   plot_data!0 = "case"
   449   plot_data!1 = "month"
   450 
   451   do n = 0,nstation-1
   452 ;----------------------------
   453 ; for observed
   454 
   455     plot_name = station(n)+"_ob"    
   456     title = station(n)+"("+sprintf("%5.2f",lat_ob(n))+","+sprintf("%5.2f",lon_ob(n))+")"
   457     res@tiMainString = title
   458 
   459     wks = gsn_open_wks (plot_type,plot_name)
   460     plot=new(nfield,graphic)                        ; create graphic array   
   461 
   462     do i = 0,nfield-1                           
   463        plot_data(0,:) = (/data_ob (n,i,:)/)
   464        plot_data@long_name = field(i)+" ("+field_unit(i)+")"   
   465        plot(i)=gsn_csm_xy(wks,mon,plot_data(0,:),res)    ; create plot 
   466     end do
   467 
   468     gsn_panel(wks,plot,(/3,2/),pres)                 ; create panel plot
   469 
   470     system("convert "+plot_name+"."+plot_type+" "+plot_name+"."+plot_type_new+";"+ \
   471            "rm "+plot_name+"."+plot_type)
   472 
   473     clear (wks)  
   474     delete (plot)
   475 ;----------------------------
   476 ; for model_vs_ob
   477 
   478     plot_name = station(n)+"_model_vs_ob"
   479     title = station(n)+"("+sprintf("%5.2f",lat_ob(n))+","+sprintf("%5.2f",lon_ob(n))+")"    
   480     res@tiMainString = title
   481 
   482     wks = gsn_open_wks (plot_type,plot_name)
   483     plot=new(nfield,graphic)                         ; create graphic array   
   484 
   485     do i = 0,nfield-1                           
   486        plot_data(0,:) = (/data_ob (n,i,:)/)
   487        plot_data(1,:) = (/data_mod(n,i,:)/)
   488        plot_data@long_name = field(i)+" ("+field_unit(i)+")"   
   489        plot(i)=gsn_csm_xy(wks,mon,plot_data,res)     ; create plot 
   490     end do
   491    
   492     gsn_panel(wks,plot,(/3,2/),pres)                 ; create panel plot
   493 
   494     system("convert "+plot_name+"."+plot_type+" "+plot_name+"."+plot_type_new+";"+ \
   495            "rm "+plot_name+"."+plot_type)
   496 
   497     clear (wks)  
   498     delete (plot)
   499  end do
   500 
   501 ;*******************************************************************
   502 ; html table of site: observed
   503 ;*******************************************************************
   504   output_html = "line_ob.html"
   505 
   506   header = (/"<HTML>" \
   507             ,"<HEAD>" \
   508             ,"<TITLE>CLAMP metrics</TITLE>" \
   509             ,"</HEAD>" \
   510             ,"<H1>Energy at Site: Observation</H1>" \
   511             /) 
   512   footer = "</HTML>"
   513 
   514   table_header = (/ \
   515         "<table border=1 cellspacing=0 cellpadding=3 width=60%>" \
   516        ,"<tr>" \
   517        ,"   <th bgcolor=DDDDDD >Site Name</th>" \
   518        ,"   <th bgcolor=DDDDDD >Latitude</th>" \
   519        ,"   <th bgcolor=DDDDDD >Longitude</th>" \
   520        ,"   <th bgcolor=DDDDDD >Observed</th>" \ 
   521        ,"</tr>" \
   522        /)
   523   table_footer = "</table>"
   524   row_header = "<tr>"
   525   row_footer = "</tr>"
   526 
   527   lines = new(50000,string)
   528   nline = 0
   529 
   530   set_line(lines,nline,header)
   531   set_line(lines,nline,table_header)
   532 ;-----------------------------------------------
   533 ; row of table
   534   
   535   do n = 0,nstation-1
   536      set_line(lines,nline,row_header)
   537 
   538      txt0 = station(n)
   539      txt1 = sprintf("%5.2f", lat_ob(n))
   540      txt2 = sprintf("%5.2f", lon_ob(n))
   541      txt3 = year_ob(n)
   542 
   543      set_line(lines,nline,"<th><a href="+txt0+"_ob.png>"+txt0+"</a></th>")
   544      set_line(lines,nline,"<th>"+txt1+"</th>")
   545      set_line(lines,nline,"<th>"+txt2+"</th>")
   546      set_line(lines,nline,"<th>"+txt3+"</th>")
   547 
   548      set_line(lines,nline,row_footer)
   549   end do
   550 ;-----------------------------------------------
   551   set_line(lines,nline,table_footer)
   552   set_line(lines,nline,footer) 
   553 
   554 ; Now write to an HTML file.
   555   idx = ind(.not.ismissing(lines))
   556   if(.not.any(ismissing(idx))) then
   557     asciiwrite(output_html,lines(idx))
   558   else
   559    print ("error?")
   560   end if
   561   delete (idx)
   562 
   563 ;*******************************************************************
   564 ; score and line table : model vs observed
   565 ;*******************************************************************
   566   output_html = "score+line_vs_ob.html"
   567 
   568   header = (/"<HTML>" \
   569             ,"<HEAD>" \
   570             ,"<TITLE>CLAMP metrics</TITLE>" \
   571             ,"</HEAD>" \
   572             ,"<H1>Energy at Site: Model "+model_name+"</H1>" \
   573             /) 
   574   footer = "</HTML>"
   575 
   576   delete (table_header)
   577   table_header = (/ \
   578         "<table border=1 cellspacing=0 cellpadding=3 width=100%>" \
   579        ,"<tr>" \
   580        ,"   <th bgcolor=DDDDDD >Site Name</th>" \
   581        ,"   <th bgcolor=DDDDDD >Latitude</th>" \
   582        ,"   <th bgcolor=DDDDDD >Longitude</th>" \
   583        ,"   <th bgcolor=DDDDDD >Observed</th>" \
   584        ,"   <th bgcolor=DDDDDD >CO2 Flux</th>" \
   585        ,"   <th bgcolor=DDDDDD >Net Radiation</th>" \
   586        ,"   <th bgcolor=DDDDDD >Latent Heat</th>" \
   587        ,"   <th bgcolor=DDDDDD >Sensible Heat</th>" \
   588        ,"   <th bgcolor=DDDDDD >GPP Glux</th>" \
   589        ,"   <th bgcolor=DDDDDD >Respiration</th>" \
   590        ,"   <th bgcolor=DDDDDD >Average</th>" \
   591        ,"</tr>" \
   592        /)
   593   table_footer = "</table>"
   594   row_header = "<tr>"
   595   row_footer = "</tr>"
   596 
   597   lines = new(50000,string)
   598   nline = 0
   599 
   600   set_line(lines,nline,header)
   601   set_line(lines,nline,table_header)
   602 ;-----------------------------------------------
   603 ; row of table
   604   
   605   do n = 0,nstation-1
   606      set_line(lines,nline,row_header)
   607 
   608      txt0  = station(n)
   609      txt1  = sprintf("%5.2f", lat_ob(n))
   610      txt2  = sprintf("%5.2f", lon_ob(n))
   611      txt3  = year_ob(n)
   612      txt4  = sprintf("%5.2f", M_score(n,0))
   613      txt5  = sprintf("%5.2f", M_score(n,1))
   614      txt6  = sprintf("%5.2f", M_score(n,2))
   615      txt7  = sprintf("%5.2f", M_score(n,3))
   616      txt8  = sprintf("%5.2f", M_score(n,4))
   617      txt9  = sprintf("%5.2f", M_score(n,5))
   618      txt10 = sprintf("%5.2f", avg(M_score(n,:)))
   619 
   620      set_line(lines,nline,"<th><a href="+txt0+"_model_vs_ob.png>"+txt0+"</a></th>")
   621      set_line(lines,nline,"<th>"+txt1+"</th>")
   622      set_line(lines,nline,"<th>"+txt2+"</th>")
   623      set_line(lines,nline,"<th>"+txt3+"</th>")
   624      set_line(lines,nline,"<th>"+txt4+"</th>")
   625      set_line(lines,nline,"<th>"+txt5+"</th>")
   626      set_line(lines,nline,"<th>"+txt6+"</th>")
   627      set_line(lines,nline,"<th>"+txt7+"</th>")
   628      set_line(lines,nline,"<th>"+txt8+"</th>")
   629      set_line(lines,nline,"<th>"+txt9+"</th>")
   630      set_line(lines,nline,"<th>"+txt10+"</th>")
   631 
   632      set_line(lines,nline,row_footer)
   633   end do
   634 
   635 ; last row, summary
   636   set_line(lines,nline,row_header)
   637 
   638   txt0  = "All_"+sprintf("%.0f", nstation)
   639   txt1  = "-"
   640   txt2  = "-"
   641   txt3  = "-"
   642   txt4  = M_energy_co2
   643   txt5  = M_energy_rad
   644   txt6  = M_energy_lh
   645   txt7  = M_energy_sh
   646   txt8  = M_energy_gpp
   647   txt9  = M_energy_er
   648   txt10 = M_energy_all
   649 
   650   set_line(lines,nline,"<th>"+txt0+"</th>")
   651   set_line(lines,nline,"<th>"+txt1+"</th>")
   652   set_line(lines,nline,"<th>"+txt2+"</th>")
   653   set_line(lines,nline,"<th>"+txt3+"</th>")
   654   set_line(lines,nline,"<th>"+txt4+"</th>")
   655   set_line(lines,nline,"<th>"+txt5+"</th>")
   656   set_line(lines,nline,"<th>"+txt6+"</th>")
   657   set_line(lines,nline,"<th>"+txt7+"</th>")
   658   set_line(lines,nline,"<th>"+txt8+"</th>")
   659   set_line(lines,nline,"<th>"+txt9+"</th>")
   660   set_line(lines,nline,"<th>"+txt10+"</th>")
   661 
   662   set_line(lines,nline,row_footer)
   663 ;-----------------------------------------------
   664   set_line(lines,nline,table_footer)
   665   set_line(lines,nline,footer) 
   666 
   667 ; Now write to an HTML file.
   668   idx = ind(.not.ismissing(lines))
   669   if(.not.any(ismissing(idx))) then
   670     asciiwrite(output_html,lines(idx))
   671   else
   672    print ("error?")
   673   end if
   674   delete (idx)
   675 
   676 ;***************************************************************************
   677 ; output plots
   678 ;***************************************************************************
   679   output_dir = model_name+"/ameriflux"
   680 
   681   system("mv *.png *.html " + output_dir) 
   682 ;***************************************************************************
   683 end