ameriflux/17.plot.ncl
author Forrest Hoffman <forrest@climatemodeling.org>
Mon, 26 Jan 2009 22:08:20 -0500
changeset 0 0c6405ab2ff4
permissions -rw-r--r--
Initial commit of C-LAMP Diagnostics from Jeff Lee
     1 ;************************************************************
     2 ; add time series plot
     3 ; sort by latitude in decending order (N->S)
     4 ; find year_ob >= 4
     5 ; add year_ob_i and year_ob_f
     6 ; change long_name
     7 ;************************************************************
     8 load "$NCARG_ROOT/lib/ncarg/nclscripts/csm/gsn_code.ncl"
     9 load "$NCARG_ROOT/lib/ncarg/nclscripts/csm/gsn_csm.ncl"
    10 load "$NCARG_ROOT/lib/ncarg/nclscripts/csm/contributed.ncl"
    11 ;************************************************************
    12 procedure set_line(lines:string,nline:integer,newlines:string) 
    13 begin
    14 ; add line to ascci/html file
    15     
    16   nnewlines = dimsizes(newlines)
    17   if(nline+nnewlines-1.ge.dimsizes(lines))
    18     print("set_line: bad index, not setting anything.") 
    19     return
    20   end if 
    21   lines(nline:nline+nnewlines-1) = newlines
    22 ;  print ("lines = " + lines(nline:nline+nnewlines-1))
    23   nline = nline + nnewlines
    24   return 
    25 end
    26 ;*************************************************************
    27 begin
    28 
    29   plot_type     = "ps"
    30   plot_type_new = "png"
    31 
    32 ;************************************************
    33 ; read model data
    34 ;************************************************
    35   model = "cn"
    36 ; model = "casa"
    37   
    38   model_name = "i01.10" + model
    39   
    40 ; change to unit of observed (u mol/m2/s)
    41 ; Model_units [=] gC/m2/s
    42 ; 12. = molecular weight of C
    43 ; u mol = 1e-6 mol
    44   factor = 1e6 /12.
    45 
    46   ENERGY ="new"
    47 
    48 ;************************************************
    49 ; read data: observed
    50 ;************************************************
    51 
    52  station = (/"ARM_Oklahoma" \
    53             ,"ARM_Oklahoma_burn" \
    54             ,"ARM_Oklahoma_control" \
    55             ,"Atqasuk" \
    56             ,"Audubon" \
    57             ,"AustinCary" \
    58             ,"Bartlett" \
    59             ,"Bondville" \
    60             ,"Brookings" \
    61             ,"Donaldson" \
    62             ,"Duke_Forest_Hardwoods" \
    63             ,"Duke_Forest_Open_Field" \
    64             ,"Duke_Forest_Pine" \
    65             ,"Fermi_Ag" \
    66             ,"Fermi_Prairie" \
    67             ,"Flagstaff_Managed" \
    68             ,"Flagstaff_Unmanaged" \
    69             ,"Flagstaff_Wildfire" \
    70             ,"FortPeck" \
    71             ,"FreemanRanch_mesquite" \
    72             ,"Goodwin_Creek" \
    73             ,"HarvardForest" \
    74             ,"HarvardForestHemlock" \
    75             ,"HowlandForestMain" \
    76             ,"HowlandForestWest" \
    77             ,"Ivotuk" \
    78             ,"KendallGrasslands" \
    79             ,"KennedySpaceCenterPine" \
    80             ,"KennedySpaceCenterScrub" \
    81             ,"LittleProspect" \
    82             ,"LostCreek" \
    83             ,"Mead-irrigated" \
    84             ,"Mead-irrigated-rotation" \
    85             ,"Mead-rainfed" \
    86             ,"Metolius_2nd_YoungPonderosaPine" \
    87             ,"MetoliusEyerly" \
    88             ,"MetoliusIntermediatePine" \
    89             ,"MetoliusOldPonderosaPine" \
    90             ,"MissouriOzark" \
    91             ,"Mize" \
    92             ,"MorganMonroe" \
    93             ,"NiwotRidge" \
    94             ,"NorthCarolina_cc" \
    95             ,"NorthCarolina_lp" \
    96             ,"ParkFalls" \
    97             ,"Rayonier" \
    98             ,"SantaRita" \
    99             ,"SkyOaks_Old" \
   100             ,"SkyOaks_PostFire" \
   101             ,"SkyOaks_Young" \
   102             ,"SylvaniaWilderness" \
   103             ,"Toledo" \
   104             ,"Tonzi" \
   105             ,"UCI_1850" \
   106             ,"UCI_1930" \
   107             ,"UCI_1964" \
   108             ,"UCI_1964wet" \
   109             ,"UCI_1981" \
   110             ,"UCI_1989" \
   111             ,"UCI_1998" \
   112             ,"UMBS" \
   113             ,"Vaira" \
   114             ,"WalkerBranch" \
   115             ,"WillowCreek" \
   116             ,"WindRiver" \
   117             ,"Wisconsin_ihw" \
   118             ,"Wisconsin_irp" \
   119             ,"Wisconsin_mrp" \
   120             ,"Wisconsin_myjp" \
   121             ,"Wisconsin_pb" \
   122             ,"Wisconsin_rpcc" \
   123             ,"Wisconsin_yhw" \
   124             ,"Wisconsin_yjp" \
   125             ,"Wisconsin_yrp" \
   126             /)
   127 
   128  year_ob = (/"2003-2006" \
   129             ,"2005-2006" \
   130             ,"2005-2006" \
   131             ,"1999-2006" \
   132             ,"2002-2006" \
   133             ,"2000-2005" \
   134             ,"2004-2005" \
   135             ,"1996-2006" \
   136             ,"2004-2006" \
   137             ,"1999-2004" \
   138             ,"2003-2005" \
   139             ,"2001-2005" \
   140             ,"2001-2005" \
   141             ,"2005-2006" \
   142             ,"2004-2006" \
   143             ,"2005-2006" \
   144             ,"2005-2006" \
   145             ,"2005-2006" \
   146             ,"2000-2006" \
   147             ,"2004-2006" \
   148             ,"2002-2006" \
   149             ,"1991-2004" \
   150             ,"2004-2004" \
   151             ,"1996-2004" \
   152             ,"1999-2004" \
   153             ,"2003-2006" \
   154             ,"2004-2006" \
   155             ,"2002-2002" \
   156             ,"2000-2006" \
   157             ,"2002-2005" \
   158             ,"2001-2005" \
   159             ,"2001-2005" \
   160             ,"2001-2005" \
   161             ,"2001-2005" \
   162             ,"2004-2005" \
   163             ,"2004-2005" \
   164             ,"2003-2005" \
   165             ,"1996-2000" \
   166             ,"2004-2006" \
   167             ,"1998-2004" \
   168             ,"1999-2005" \
   169             ,"1999-2003" \
   170             ,"2005-2006" \
   171             ,"2005-2006" \
   172             ,"1996-2003" \
   173             ,"1998-1998" \
   174             ,"2004-2006" \
   175             ,"1997-2006" \
   176             ,"2004-2006" \
   177             ,"1997-2006" \
   178             ,"2002-2006" \
   179             ,"2004-2005" \
   180             ,"2001-2006" \
   181             ,"2004-2005" \
   182             ,"2001-2005" \
   183             ,"2001-2005" \
   184             ,"2002-2004" \
   185             ,"2001-2005" \
   186             ,"2001-2005" \
   187             ,"2002-2005" \
   188             ,"1999-2003" \
   189             ,"2001-2006" \
   190             ,"1995-1999" \
   191             ,"1999-2005" \
   192             ,"1999-2004" \
   193             ,"2003-2003" \
   194             ,"2003-2003" \
   195             ,"2002-2005" \
   196             ,"2004-2004" \
   197             ,"2002-2002" \
   198             ,"2005-2005" \
   199             ,"2002-2002" \
   200             ,"2004-2005" \
   201             ,"2002-2002" \
   202             /)
   203 
   204  year_ob_i = (/2003 \
   205             ,2005 \
   206             ,2005 \
   207             ,1999 \
   208             ,2002 \
   209             ,2000 \
   210             ,2004 \
   211             ,1996 \
   212             ,2004 \
   213             ,1999 \
   214             ,2003 \
   215             ,2001 \
   216             ,2001 \
   217             ,2005 \
   218             ,2004 \
   219             ,2005 \
   220             ,2005 \
   221             ,2005 \
   222             ,2000 \
   223             ,2004 \
   224             ,2002 \
   225             ,1991 \
   226             ,2004 \
   227             ,1996 \
   228             ,1999 \
   229             ,2003 \
   230             ,2004 \
   231             ,2002 \
   232             ,2000 \
   233             ,2002 \
   234             ,2001 \
   235             ,2001 \
   236             ,2001 \
   237             ,2001 \
   238             ,2004 \
   239             ,2004 \
   240             ,2003 \
   241             ,1996 \
   242             ,2004 \
   243             ,1998 \
   244             ,1999 \
   245             ,1999 \
   246             ,2005 \
   247             ,2005 \
   248             ,1996 \
   249             ,1998 \
   250             ,2004 \
   251             ,1997 \
   252             ,2004 \
   253             ,1997 \
   254             ,2002 \
   255             ,2004 \
   256             ,2001 \
   257             ,2004 \
   258             ,2001 \
   259             ,2001 \
   260             ,2002 \
   261             ,2001 \
   262             ,2001 \
   263             ,2002 \
   264             ,1999 \
   265             ,2001 \
   266             ,1995 \
   267             ,1999 \
   268             ,1999 \
   269             ,2003 \
   270             ,2003 \
   271             ,2002 \
   272             ,2004 \
   273             ,2002 \
   274             ,2005 \
   275             ,2002 \
   276             ,2004 \
   277             ,2002 \
   278             /)
   279 
   280  year_ob_f = (/2006 \
   281             ,2006 \
   282             ,2006 \
   283             ,2006 \
   284             ,2006 \
   285             ,2005 \
   286             ,2005 \
   287             ,2006 \
   288             ,2006 \
   289             ,2004 \
   290             ,2005 \
   291             ,2005 \
   292             ,2005 \
   293             ,2006 \
   294             ,2006 \
   295             ,2006 \
   296             ,2006 \
   297             ,2006 \
   298             ,2006 \
   299             ,2006 \
   300             ,2006 \
   301             ,2004 \
   302             ,2004 \
   303             ,2004 \
   304             ,2004 \
   305             ,2006 \
   306             ,2006 \
   307             ,2002 \
   308             ,2006 \
   309             ,2005 \
   310             ,2005 \
   311             ,2005 \
   312             ,2005 \
   313             ,2005 \
   314             ,2005 \
   315             ,2005 \
   316             ,2005 \
   317             ,2000 \
   318             ,2006 \
   319             ,2004 \
   320             ,2005 \
   321             ,2003 \
   322             ,2006 \
   323             ,2006 \
   324             ,2003 \
   325             ,1998 \
   326             ,2006 \
   327             ,2006 \
   328             ,2006 \
   329             ,2006 \
   330             ,2006 \
   331             ,2005 \
   332             ,2006 \
   333             ,2005 \
   334             ,2005 \
   335             ,2005 \
   336             ,2004 \
   337             ,2005 \
   338             ,2005 \
   339             ,2005 \
   340             ,2003 \
   341             ,2006 \
   342             ,1999 \
   343             ,2005 \
   344             ,2004 \
   345             ,2003 \
   346             ,2003 \
   347             ,2005 \
   348             ,2004 \
   349             ,2002 \
   350             ,2005 \
   351             ,2002 \
   352             ,2005 \
   353             ,2002 \
   354             /)
   355 
   356  field   = (/"NEE Flux" \
   357             ,"Net Radiation" \
   358             ,"Latent Heat" \
   359             ,"Sensible Heat" \
   360             ,"GPP Flux" \
   361             ,"Respiration" \
   362             /)
   363 
   364  field_unit = (/"u mol/m2/s" \
   365                ,"W/m2" \
   366                ,"W/m2" \
   367                ,"W/m2" \
   368                ,"u mol/m2/s" \
   369                ,"u mol/m2/s" \
   370                /)
   371 
   372  nfield = dimsizes(field)
   373 
   374 ;========================================================================
   375 ; find (# of year observed) >=4 and year_ob_i <= 2001
   376 
   377  dir_root = "/fis/cgd/cseg/people/jeff/clamp/ameriflux/data/"
   378  
   379  nstation = dimsizes(station)
   380 
   381  year_station = new ((/nstation/),integer)
   382 
   383  do n = 0,nstation-1
   384 
   385     diro = dir_root + station(n)+"/"
   386     filo = year_ob_i(n)+"-"+year_ob_f(n)+"_L4_m.nc"
   387     fo   = addfile (diro+filo,"r")
   388  
   389     year = fo->year
   390     year_station(n) = dimsizes(year)
   391     delete (year) 
   392     
   393  end do
   394 
   395  delete (fo)
   396 
   397  i_long_ob = ind(year_station .ge. 4 .and. year_ob_i .le. 2001)
   398  
   399  station_long = station(i_long_ob)
   400  year_ob_long = year_ob(i_long_ob)
   401  year_ob_i_long = year_ob_i(i_long_ob)
   402  year_ob_f_long = year_ob_f(i_long_ob)
   403  year_station_long = year_station(i_long_ob)
   404 
   405  nstation  = dimsizes(station_long)
   406 ; print (nstation)
   407 ; print (i_long_ob)
   408 ; print (year_ob_i(i_long_ob))
   409 ; print (station_long)
   410 
   411 ;========================================================================
   412 ; get observed lat and lon
   413 
   414  dir_root = "/fis/cgd/cseg/people/jeff/clamp/ameriflux/data/"
   415 
   416  lat_ob    = new ((/nstation/),float)
   417  lon_ob    = new ((/nstation/),float)
   418 
   419  do n = 0,nstation-1
   420 
   421     diro = dir_root + station_long(n)+"/"
   422     filo = year_ob_i_long(n)+"-"+year_ob_f_long(n)+"_L4_m.nc"
   423     fo   = addfile (diro+filo,"r")
   424 
   425 ;   print (diro)
   426 ;   print (filo)
   427  
   428     lon_ob(n) = fo->lon 
   429     lat_ob(n) = fo->lat
   430 
   431     delete (fo)
   432     
   433  end do
   434 
   435 ;=========================================================
   436 ;   get model data at observed lat-lon
   437 
   438     dirm = "/fis/cgd/cseg/people/jeff/clamp_data/model/"    
   439     film = model_name+"_ameriflux_1990-2004_monthly.nc"
   440     fm   = addfile (dirm+film,"r")
   441 
   442     xm   = fm->lon
   443     ym   = fm->lat 
   444     date = fm->date
   445 
   446     date_dim = dimsizes(date)
   447     nyear  = date_dim(0)
   448 
   449     nmonth =12
   450 
   451     data_mod = new ((/nfield,nyear,nmonth,nstation/),float)
   452 
   453 ;************************************************************
   454 ; interpolate model data into observed station
   455 ; note: model is 0-360E, 90S-90N
   456 ;************************************************************
   457 
   458 ;   to be able to handle observation at (-89.98,-24.80)
   459     ym(0) = -90.  
   460 
   461 if (ENERGY .eq. "old") then
   462 
   463   data = fm->NEE
   464   data_mod(0,:,:,:) = data(:,:,:) * factor
   465 
   466 ; data  = fm->LATENT
   467   data1 = fm->FCEV
   468   data2 = fm->FCTR
   469   data3 = fm->FGEV
   470   data_mod(2,:,:,:) = data1(:,:,:)+data2(:,:,:)+data3(:,:,:) 
   471   delete (data1)
   472   delete (data2)
   473   delete (data3)
   474 
   475 ; data = fm->SENSIBLE
   476   data  = fm->FSH
   477   data_mod(3,:,:,:) = data(:,:,:) 
   478 
   479 ; data  = fm->NETRAD
   480   data1 = fm->FSA
   481   data2 = fm->FIRA
   482   data_mod(1,:,:,:) = data1(:,:,:)-data2(:,:,:) 
   483   delete (data1)
   484   delete (data2)
   485 
   486 else
   487 
   488   data = fm->NEE
   489   yy = linint2_points_Wrap(xm,ym,data,True,lon_ob,lat_ob,0)
   490   data_mod(0,:,:,:) = yy(:,:,:) * factor
   491 
   492   data = fm->NETRAD
   493   yy = linint2_points_Wrap(xm,ym,data,True,lon_ob,lat_ob,0)
   494   data_mod(1,:,:,:) = yy(:,:,:) 
   495 
   496   data = fm->LATENT
   497   yy = linint2_points_Wrap(xm,ym,data,True,lon_ob,lat_ob,0)
   498   data_mod(2,:,:,:) = yy(:,:,:) 
   499 
   500 ; data = fm->SENSIBLE
   501   data = fm->FSH
   502   yy = linint2_points_Wrap(xm,ym,data,True,lon_ob,lat_ob,0)
   503   data_mod(3,:,:,:) = yy(:,:,:) 
   504 
   505 end if
   506 
   507   data = fm->GPP
   508   yy = linint2_points_Wrap(xm,ym,data,True,lon_ob,lat_ob,0)
   509   data_mod(4,:,:,:) = yy(:,:,:) * factor 
   510 
   511   if (model .eq. "cn") then
   512      data = fm->ER
   513   else
   514      data1 = fm->AR
   515      data2 = fm->HR
   516      data  = data1 + data2
   517     
   518      delete (data1)
   519      delete (data2)
   520   end if
   521 
   522   yy = linint2_points_Wrap(xm,ym,data,True,lon_ob,lat_ob,0)
   523   data_mod(5,:,:,:) = yy(:,:,:) * factor
   524 
   525   delete (fm) 
   526   delete (data)
   527 
   528 ;*******************************************************************
   529 ; for station line plot
   530 ;*******************************************************************
   531 
   532 ; for x-axis in xyplot
   533   mon = ispan(1,12,1)
   534   mon@long_name = "month"
   535 
   536   res                   = True               ; plot mods desired
   537   res@xyLineThicknesses = (/2.0,2.0/)        ; make 2nd lines thicker
   538   res@xyLineColors      = (/"blue","red"/)   ; line color (ob,model)
   539 
   540   res@tmXBFormat  = "f"                      ; not to add trailing zeros
   541 
   542 ;-------------------------------------------------------------------------
   543 ; Add a boxed legend using the more simple method
   544 
   545   res@pmLegendDisplayMode    = "Always"
   546 ; res@pmLegendWidthF         = 0.1
   547   res@pmLegendWidthF         = 0.08
   548   res@pmLegendHeightF        = 0.06
   549 ; res@pmLegendOrthogonalPosF = -1.17
   550 ; res@pmLegendOrthogonalPosF = -1.00  ;(downward)
   551   res@pmLegendOrthogonalPosF = -0.30  ;(downward)
   552 
   553 ; res@pmLegendParallelPosF   =  0.18
   554   res@pmLegendParallelPosF   =  0.23  ;(rightward)
   555 
   556 ; res@lgPerimOn             = False
   557   res@lgLabelFontHeightF     = 0.015
   558   res@xyExplicitLegendLabels = (/"observed",model_name/)
   559 ;-------------------------------------------------------------------
   560 ; for panel plot
   561   res@gsnFrame     = False                   ; Do not draw plot 
   562   res@gsnDraw      = False                   ; Do not advance frame
   563 
   564   pres                            = True     ; panel plot mods desired
   565   pres@gsnPanelYWhiteSpacePercent = 5        ; increase white space around
   566                                              ; indiv. plots in panel
   567   pres@gsnMaximize                = True     ; fill the page
   568 ;-------------------------------------------------------------------
   569 
   570 ;==============================================================
   571 ; get ob data at each site
   572 
   573   dir_root = "/fis/cgd/cseg/people/jeff/clamp/ameriflux/data/"
   574 
   575   do n = 0,nstation-1
   576 ; do n = 2,6
   577 
   578     year_setback = 0
   579 
   580     nyear = year_station_long(n)
   581 
   582     if (year_ob_f_long(n).eq. 2006) then
   583        year_setback = 2006 -2004
   584     end if
   585     if (year_ob_f_long(n).eq. 2005) then
   586        year_setback = 2005 -2004
   587     end if
   588     
   589     ntime = (nyear - year_setback) * nmonth
   590     print (nyear)
   591 
   592     data_ob   = new ((/nfield, nyear, nmonth/),float)
   593 
   594     diro = dir_root + station_long(n)+"/"
   595     filo = year_ob_i_long(n)+"-"+year_ob_f_long(n)+"_L4_m.nc"
   596     fo   = addfile (diro+filo,"r")
   597 
   598     print (diro)
   599     print (filo)
   600  
   601     lon_ob(n) = fo->lon 
   602     lat_ob(n) = fo->lat
   603 
   604     data      = fo->NEE_or_fMDS
   605     data_ob(0,:,:) = data(:,:)
   606     delete (data)
   607 
   608     data      = fo->Rg_f
   609     data_ob(1,:,:) = data(:,:)
   610     delete (data)
   611 
   612     data      = fo->LE_f
   613     data_ob(2,:,:) = data(:,:)
   614     delete (data)
   615 
   616     data      = fo->H_f
   617     data_ob(3,:,:) = data(:,:)
   618     delete (data)
   619 
   620     data      = fo->GPP_or_MDS
   621     data_ob(4,:,:) = data(:,:)
   622     delete (data)
   623 
   624     data      = fo->Reco_or
   625     data_ob(5,:,:) = data(:,:)
   626     delete (data)
   627 
   628     delete (fo)
   629 
   630     timeI = new((/ntime/),integer)
   631     timeF = new((/ntime/),float)
   632     timeI = ispan(1,ntime,1)
   633     timeF = year_ob_i_long(n) + (timeI-1)/12.
   634     timeF@long_name = "year" 
   635 
   636     plot_data = new((/2,ntime/),float)
   637  
   638 ;----------------------------
   639 ; for model_vs_ob
   640 
   641     plot_name = station_long(n)+"_model_vs_ob"
   642     title = station_long(n)+"("+sprintf("%5.2f",lat_ob(n))+","+sprintf("%5.2f",lon_ob(n))+")"    
   643     res@tiMainString = title
   644 
   645     wks = gsn_open_wks (plot_type,plot_name)
   646     plot=new(nfield,graphic)                         ; create graphic array   
   647 
   648     i_year_mod_i = year_ob_i_long(n) - 1990 
   649     i_year_mod_f = i_year_mod_i + nyear - 1 - year_setback
   650 
   651     i_year_ob_f =  nyear - year_setback - 1 
   652 
   653     print (nyear)
   654     print (i_year_ob_f)
   655     print (i_year_mod_i)
   656     print (i_year_mod_f)
   657 
   658     do i = 0,nfield-1                           
   659        plot_data(0,:) = ndtooned(data_ob (i,0:i_year_ob_f,:))
   660        plot_data(1,:) = ndtooned(data_mod(i,i_year_mod_i:i_year_mod_f,:,n))
   661        plot_data@long_name = field(i)+" ("+field_unit(i)+")"   
   662        plot(i)=gsn_csm_xy(wks,timeF,plot_data,res)            ; create plot 
   663     end do
   664    
   665     gsn_panel(wks,plot,(/3,2/),pres)                    ; create panel plot
   666 
   667     system("convert "+plot_name+"."+plot_type+" "+plot_name+"."+plot_type_new+";"+ \
   668            "rm "+plot_name+"."+plot_type)
   669 
   670     clear (wks)  
   671     delete (plot)
   672 
   673     delete (data_ob)
   674     delete (timeI)    
   675     delete (timeF)
   676     delete (plot_data)
   677 
   678  end do
   679 exit
   680 ;###################################################################
   681 ; for the following tables,
   682 ; sort by latitude in decending order (N->S)
   683 
   684   isort = dim_pqsort(lat_ob,-1)
   685 
   686   station_sort = station_long(isort)
   687   year_ob_sort = year_ob_long(isort)
   688   lat_ob_sort  = lat_ob(isort)
   689   lon_ob_sort  = lon_ob(isort)
   690   M_score_sort = M_score(isort,:)
   691  
   692   print(isort)
   693   print(lat_ob_sort)
   694 
   695 ;*******************************************************************
   696 ; html table of site: observed
   697 ;*******************************************************************
   698   output_html = "line_ob.html"
   699 
   700   header = (/"<HTML>" \
   701             ,"<HEAD>" \
   702             ,"<TITLE>CLAMP metrics</TITLE>" \
   703             ,"</HEAD>" \
   704             ,"<H1>Energy at Site: Observation</H1>" \
   705             /) 
   706   footer = "</HTML>"
   707 
   708   table_header = (/ \
   709         "<table border=1 cellspacing=0 cellpadding=3 width=60%>" \
   710        ,"<tr>" \
   711        ,"   <th bgcolor=DDDDDD >Site Name</th>" \
   712        ,"   <th bgcolor=DDDDDD >Latitude</th>" \
   713        ,"   <th bgcolor=DDDDDD >Longitude</th>" \
   714        ,"   <th bgcolor=DDDDDD >Observed</th>" \ 
   715        ,"</tr>" \
   716        /)
   717   table_footer = "</table>"
   718   row_header = "<tr>"
   719   row_footer = "</tr>"
   720 
   721   lines = new(50000,string)
   722   nline = 0
   723 
   724   set_line(lines,nline,header)
   725   set_line(lines,nline,table_header)
   726 ;-----------------------------------------------
   727 ; row of table
   728   
   729   do n = 0,nstation-1
   730 
   731      set_line(lines,nline,row_header)
   732 
   733      txt0 = station_sort(n)
   734      txt1 = sprintf("%5.2f", lat_ob_sort(n))
   735      txt2 = sprintf("%5.2f", lon_ob_sort(n))
   736      txt3 = year_ob_sort(n)
   737 
   738      set_line(lines,nline,"<th><a href="+txt0+"_ob.png>"+txt0+"</a></th>")
   739      set_line(lines,nline,"<th>"+txt1+"</th>")
   740      set_line(lines,nline,"<th>"+txt2+"</th>")
   741      set_line(lines,nline,"<th>"+txt3+"</th>")
   742 
   743      set_line(lines,nline,row_footer)
   744   end do
   745 ;-----------------------------------------------
   746   set_line(lines,nline,table_footer)
   747   set_line(lines,nline,footer) 
   748 
   749 ; Now write to an HTML file.
   750   idx = ind(.not.ismissing(lines))
   751   if(.not.any(ismissing(idx))) then
   752     asciiwrite(output_html,lines(idx))
   753   else
   754    print ("error?")
   755   end if
   756   delete (idx)
   757 
   758 ;*******************************************************************
   759 ; score and line table : model vs observed
   760 ;*******************************************************************
   761   output_html = "score+line_vs_ob.html"
   762 
   763   header = (/"<HTML>" \
   764             ,"<HEAD>" \
   765             ,"<TITLE>CLAMP metrics</TITLE>" \
   766             ,"</HEAD>" \
   767             ,"<H1>Energy at Site: Model "+model_name+"</H1>" \
   768             /) 
   769   footer = "</HTML>"
   770 
   771   delete (table_header)
   772   table_header = (/ \
   773         "<table border=1 cellspacing=0 cellpadding=3 width=100%>" \
   774        ,"<tr>" \
   775        ,"   <th bgcolor=DDDDDD >Site Name</th>" \
   776        ,"   <th bgcolor=DDDDDD >Latitude</th>" \
   777        ,"   <th bgcolor=DDDDDD >Longitude</th>" \
   778        ,"   <th bgcolor=DDDDDD >Observed</th>" \
   779        ,"   <th bgcolor=DDDDDD >CO2 Flux</th>" \
   780        ,"   <th bgcolor=DDDDDD >Net Radiation</th>" \
   781        ,"   <th bgcolor=DDDDDD >Latent Heat</th>" \
   782        ,"   <th bgcolor=DDDDDD >Sensible Heat</th>" \
   783        ,"   <th bgcolor=DDDDDD >GPP Glux</th>" \
   784        ,"   <th bgcolor=DDDDDD >Respiration</th>" \
   785        ,"   <th bgcolor=DDDDDD >Average</th>" \
   786        ,"</tr>" \
   787        /)
   788   table_footer = "</table>"
   789   row_header = "<tr>"
   790   row_footer = "</tr>"
   791 
   792   lines = new(50000,string)
   793   nline = 0
   794 
   795   set_line(lines,nline,header)
   796   set_line(lines,nline,table_header)
   797 ;-----------------------------------------------
   798 ; row of table
   799   
   800   do n = 0,nstation-1
   801 
   802      set_line(lines,nline,row_header)
   803 
   804      txt0  = station_sort(n)
   805      txt1  = sprintf("%5.2f", lat_ob_sort(n))
   806      txt2  = sprintf("%5.2f", lon_ob_sort(n))
   807      txt3  = year_ob_sort(n)
   808      txt4  = sprintf("%5.2f", M_score_sort(n,0))
   809      txt5  = sprintf("%5.2f", M_score_sort(n,1))
   810      txt6  = sprintf("%5.2f", M_score_sort(n,2))
   811      txt7  = sprintf("%5.2f", M_score_sort(n,3))
   812      txt8  = sprintf("%5.2f", M_score_sort(n,4))
   813      txt9  = sprintf("%5.2f", M_score_sort(n,5))
   814      txt10 = sprintf("%5.2f", avg(M_score_sort(n,:)))
   815 
   816      set_line(lines,nline,"<th><a href="+txt0+"_model_vs_ob.png>"+txt0+"</a></th>")
   817      set_line(lines,nline,"<th>"+txt1+"</th>")
   818      set_line(lines,nline,"<th>"+txt2+"</th>")
   819      set_line(lines,nline,"<th>"+txt3+"</th>")
   820      set_line(lines,nline,"<th>"+txt4+"</th>")
   821      set_line(lines,nline,"<th>"+txt5+"</th>")
   822      set_line(lines,nline,"<th>"+txt6+"</th>")
   823      set_line(lines,nline,"<th>"+txt7+"</th>")
   824      set_line(lines,nline,"<th>"+txt8+"</th>")
   825      set_line(lines,nline,"<th>"+txt9+"</th>")
   826      set_line(lines,nline,"<th>"+txt10+"</th>")
   827 
   828      set_line(lines,nline,row_footer)
   829   end do
   830 
   831 ; last row, summary
   832   set_line(lines,nline,row_header)
   833 
   834   txt0  = "All_"+sprintf("%.0f", nstation)
   835   txt1  = "-"
   836   txt2  = "-"
   837   txt3  = "-"
   838   txt4  = M_energy_co2
   839   txt5  = M_energy_rad
   840   txt6  = M_energy_lh
   841   txt7  = M_energy_sh
   842   txt8  = M_energy_gpp
   843   txt9  = M_energy_er
   844   txt10 = M_energy_all
   845 
   846   set_line(lines,nline,"<th>"+txt0+"</th>")
   847   set_line(lines,nline,"<th>"+txt1+"</th>")
   848   set_line(lines,nline,"<th>"+txt2+"</th>")
   849   set_line(lines,nline,"<th>"+txt3+"</th>")
   850   set_line(lines,nline,"<th>"+txt4+"</th>")
   851   set_line(lines,nline,"<th>"+txt5+"</th>")
   852   set_line(lines,nline,"<th>"+txt6+"</th>")
   853   set_line(lines,nline,"<th>"+txt7+"</th>")
   854   set_line(lines,nline,"<th>"+txt8+"</th>")
   855   set_line(lines,nline,"<th>"+txt9+"</th>")
   856   set_line(lines,nline,"<th>"+txt10+"</th>")
   857 
   858   set_line(lines,nline,row_footer)
   859 ;-----------------------------------------------
   860   set_line(lines,nline,table_footer)
   861   set_line(lines,nline,footer) 
   862 
   863 ; Now write to an HTML file.
   864   idx = ind(.not.ismissing(lines))
   865   if(.not.any(ismissing(idx))) then
   866     asciiwrite(output_html,lines(idx))
   867   else
   868    print ("error?")
   869   end if
   870   delete (idx)
   871 
   872 ;***************************************************************************
   873 ; output plots
   874 ;***************************************************************************
   875   output_dir = model_name+"/ameriflux"
   876 
   877   system("mv *.png *.html " + output_dir) 
   878 ;***************************************************************************
   879 end