ameriflux/15.plot.ncl
author Forrest Hoffman <forrest@climatemodeling.org>
Thu, 26 Mar 2009 14:02:21 -0400
changeset 1 4be95183fbcd
permissions -rw-r--r--
Modifications to scoring and graphics production for the final version of code for the C-LAMP paper in GCB.
     1 ;************************************************************
     2 ; find year_ob >= 4
     3 ; add year_ob_i and year_ob_f
     4 ; change long_name
     5 ;************************************************************
     6 load "$NCARG_ROOT/lib/ncarg/nclscripts/csm/gsn_code.ncl"
     7 load "$NCARG_ROOT/lib/ncarg/nclscripts/csm/gsn_csm.ncl"
     8 load "$NCARG_ROOT/lib/ncarg/nclscripts/csm/contributed.ncl"
     9 ;************************************************************
    10 procedure set_line(lines:string,nline:integer,newlines:string) 
    11 begin
    12 ; add line to ascci/html file
    13     
    14   nnewlines = dimsizes(newlines)
    15   if(nline+nnewlines-1.ge.dimsizes(lines))
    16     print("set_line: bad index, not setting anything.") 
    17     return
    18   end if 
    19   lines(nline:nline+nnewlines-1) = newlines
    20 ;  print ("lines = " + lines(nline:nline+nnewlines-1))
    21   nline = nline + nnewlines
    22   return 
    23 end
    24 ;*************************************************************
    25 begin
    26 
    27   plot_type     = "ps"
    28   plot_type_new = "png"
    29 
    30 ; for 6 fields, 12-monthly
    31   nmon      = 12
    32   nfield    = 6
    33 
    34 ;************************************************
    35 ; read model data
    36 ;************************************************
    37   model = "cn"
    38 ; model = "casa"
    39   
    40   model_name = "i01.10" + model
    41 
    42   dirm  = "/fis/cgd/cseg/people/jeff/surface_data/"
    43   film  = "lnd_T42.nc"
    44   fm    = addfile(dirm+film,"r")
    45   
    46   xm    = fm->lon
    47   ym    = fm->lat
    48 ;------------------------------------------------
    49   nlat = dimsizes(ym)
    50   nlon = dimsizes(xm)
    51 
    52   data_mod0 = new ((/nfield,nmon,nlat,nlon/),float)
    53 
    54 ; change to unit of observed (u mol/m2/s)
    55 ; Model_units [=] gC/m2/s
    56 ; 12. = molecular weight of C
    57 ; u mol = 1e-6 mol
    58   factor = 1e6 /12.
    59 
    60   ENERGY ="new"
    61 
    62 ;************************************************
    63 ; read data: observed
    64 ;************************************************
    65 
    66  station = (/"ARM_Oklahoma" \
    67             ,"ARM_Oklahoma_burn" \
    68             ,"ARM_Oklahoma_control" \
    69             ,"Atqasuk" \
    70             ,"Audubon" \
    71             ,"AustinCary" \
    72             ,"Bartlett" \
    73             ,"Bondville" \
    74             ,"Brookings" \
    75             ,"Donaldson" \
    76             ,"Duke_Forest_Hardwoods" \
    77             ,"Duke_Forest_Open_Field" \
    78             ,"Duke_Forest_Pine" \
    79             ,"Fermi_Ag" \
    80             ,"Fermi_Prairie" \
    81             ,"Flagstaff_Managed" \
    82             ,"Flagstaff_Unmanaged" \
    83             ,"Flagstaff_Wildfire" \
    84             ,"FortPeck" \
    85             ,"FreemanRanch_mesquite" \
    86             ,"Goodwin_Creek" \
    87             ,"HarvardForest" \
    88             ,"HarvardForestHemlock" \
    89             ,"HowlandForestMain" \
    90             ,"HowlandForestWest" \
    91             ,"Ivotuk" \
    92             ,"KendallGrasslands" \
    93             ,"KennedySpaceCenterPine" \
    94             ,"KennedySpaceCenterScrub" \
    95             ,"LittleProspect" \
    96             ,"LostCreek" \
    97             ,"Mead-irrigated" \
    98             ,"Mead-irrigated-rotation" \
    99             ,"Mead-rainfed" \
   100             ,"Metolius_2nd_YoungPonderosaPine" \
   101             ,"MetoliusEyerly" \
   102             ,"MetoliusIntermediatePine" \
   103             ,"MetoliusOldPonderosaPine" \
   104             ,"MissouriOzark" \
   105             ,"Mize" \
   106             ,"MorganMonroe" \
   107             ,"NiwotRidge" \
   108             ,"NorthCarolina_cc" \
   109             ,"NorthCarolina_lp" \
   110             ,"ParkFalls" \
   111             ,"Rayonier" \
   112             ,"SantaRita" \
   113             ,"SkyOaks_Old" \
   114             ,"SkyOaks_PostFire" \
   115             ,"SkyOaks_Young" \
   116             ,"SylvaniaWilderness" \
   117             ,"Toledo" \
   118             ,"Tonzi" \
   119             ,"UCI_1850" \
   120             ,"UCI_1930" \
   121             ,"UCI_1964" \
   122             ,"UCI_1964wet" \
   123             ,"UCI_1981" \
   124             ,"UCI_1989" \
   125             ,"UCI_1998" \
   126             ,"UMBS" \
   127             ,"Vaira" \
   128             ,"WalkerBranch" \
   129             ,"WillowCreek" \
   130             ,"WindRiver" \
   131             ,"Wisconsin_ihw" \
   132             ,"Wisconsin_irp" \
   133             ,"Wisconsin_mrp" \
   134             ,"Wisconsin_myjp" \
   135             ,"Wisconsin_pb" \
   136             ,"Wisconsin_rpcc" \
   137             ,"Wisconsin_yhw" \
   138             ,"Wisconsin_yjp" \
   139             ,"Wisconsin_yrp" \
   140             /)
   141 
   142  year_ob = (/"2003-2006" \
   143             ,"2005-2006" \
   144             ,"2005-2006" \
   145             ,"1999-2006" \
   146             ,"2002-2006" \
   147             ,"2000-2005" \
   148             ,"2004-2005" \
   149             ,"1996-2006" \
   150             ,"2004-2006" \
   151             ,"1999-2004" \
   152             ,"2003-2005" \
   153             ,"2001-2005" \
   154             ,"2001-2005" \
   155             ,"2005-2006" \
   156             ,"2004-2006" \
   157             ,"2005-2006" \
   158             ,"2005-2006" \
   159             ,"2005-2006" \
   160             ,"2000-2006" \
   161             ,"2004-2006" \
   162             ,"2002-2006" \
   163             ,"1991-2004" \
   164             ,"2004-2004" \
   165             ,"1996-2004" \
   166             ,"1999-2004" \
   167             ,"2003-2006" \
   168             ,"2004-2006" \
   169             ,"2002-2002" \
   170             ,"2000-2006" \
   171             ,"2002-2005" \
   172             ,"2001-2005" \
   173             ,"2001-2005" \
   174             ,"2001-2005" \
   175             ,"2001-2005" \
   176             ,"2004-2005" \
   177             ,"2004-2005" \
   178             ,"2003-2005" \
   179             ,"1996-2000" \
   180             ,"2004-2006" \
   181             ,"1998-2004" \
   182             ,"1999-2005" \
   183             ,"1999-2003" \
   184             ,"2005-2006" \
   185             ,"2005-2006" \
   186             ,"1996-2003" \
   187             ,"1998-1998" \
   188             ,"2004-2006" \
   189             ,"1997-2006" \
   190             ,"2004-2006" \
   191             ,"1997-2006" \
   192             ,"2002-2006" \
   193             ,"2004-2005" \
   194             ,"2001-2006" \
   195             ,"2004-2005" \
   196             ,"2001-2005" \
   197             ,"2001-2005" \
   198             ,"2002-2004" \
   199             ,"2001-2005" \
   200             ,"2001-2005" \
   201             ,"2002-2005" \
   202             ,"1999-2003" \
   203             ,"2001-2006" \
   204             ,"1995-1999" \
   205             ,"1999-2005" \
   206             ,"1999-2004" \
   207             ,"2003-2003" \
   208             ,"2003-2003" \
   209             ,"2002-2005" \
   210             ,"2004-2004" \
   211             ,"2002-2002" \
   212             ,"2005-2005" \
   213             ,"2002-2002" \
   214             ,"2004-2005" \
   215             ,"2002-2002" \
   216             /)
   217 
   218  year_ob_i = (/2003 \
   219             ,2005 \
   220             ,2005 \
   221             ,1999 \
   222             ,2002 \
   223             ,2000 \
   224             ,2004 \
   225             ,1996 \
   226             ,2004 \
   227             ,1999 \
   228             ,2003 \
   229             ,2001 \
   230             ,2001 \
   231             ,2005 \
   232             ,2004 \
   233             ,2005 \
   234             ,2005 \
   235             ,2005 \
   236             ,2000 \
   237             ,2004 \
   238             ,2002 \
   239             ,1991 \
   240             ,2004 \
   241             ,1996 \
   242             ,1999 \
   243             ,2003 \
   244             ,2004 \
   245             ,2002 \
   246             ,2000 \
   247             ,2002 \
   248             ,2001 \
   249             ,2001 \
   250             ,2001 \
   251             ,2001 \
   252             ,2004 \
   253             ,2004 \
   254             ,2003 \
   255             ,1996 \
   256             ,2004 \
   257             ,1998 \
   258             ,1999 \
   259             ,1999 \
   260             ,2005 \
   261             ,2005 \
   262             ,1996 \
   263             ,1998 \
   264             ,2004 \
   265             ,1997 \
   266             ,2004 \
   267             ,1997 \
   268             ,2002 \
   269             ,2004 \
   270             ,2001 \
   271             ,2004 \
   272             ,2001 \
   273             ,2001 \
   274             ,2002 \
   275             ,2001 \
   276             ,2001 \
   277             ,2002 \
   278             ,1999 \
   279             ,2001 \
   280             ,1995 \
   281             ,1999 \
   282             ,1999 \
   283             ,2003 \
   284             ,2003 \
   285             ,2002 \
   286             ,2004 \
   287             ,2002 \
   288             ,2005 \
   289             ,2002 \
   290             ,2004 \
   291             ,2002 \
   292             /)
   293 
   294  year_ob_f = (/2006 \
   295             ,2006 \
   296             ,2006 \
   297             ,2006 \
   298             ,2006 \
   299             ,2005 \
   300             ,2005 \
   301             ,2006 \
   302             ,2006 \
   303             ,2004 \
   304             ,2005 \
   305             ,2005 \
   306             ,2005 \
   307             ,2006 \
   308             ,2006 \
   309             ,2006 \
   310             ,2006 \
   311             ,2006 \
   312             ,2006 \
   313             ,2006 \
   314             ,2006 \
   315             ,2004 \
   316             ,2004 \
   317             ,2004 \
   318             ,2004 \
   319             ,2006 \
   320             ,2006 \
   321             ,2002 \
   322             ,2006 \
   323             ,2005 \
   324             ,2005 \
   325             ,2005 \
   326             ,2005 \
   327             ,2005 \
   328             ,2005 \
   329             ,2005 \
   330             ,2005 \
   331             ,2000 \
   332             ,2006 \
   333             ,2004 \
   334             ,2005 \
   335             ,2003 \
   336             ,2006 \
   337             ,2006 \
   338             ,2003 \
   339             ,1998 \
   340             ,2006 \
   341             ,2006 \
   342             ,2006 \
   343             ,2006 \
   344             ,2006 \
   345             ,2005 \
   346             ,2006 \
   347             ,2005 \
   348             ,2005 \
   349             ,2005 \
   350             ,2004 \
   351             ,2005 \
   352             ,2005 \
   353             ,2005 \
   354             ,2003 \
   355             ,2006 \
   356             ,1999 \
   357             ,2005 \
   358             ,2004 \
   359             ,2003 \
   360             ,2003 \
   361             ,2005 \
   362             ,2004 \
   363             ,2002 \
   364             ,2005 \
   365             ,2002 \
   366             ,2005 \
   367             ,2002 \
   368             /)
   369 
   370  year_ob_long = ind((year_ob_f - year_ob_i) .ge. 4 .and. year_ob_i .le. 2001)
   371  print (year_ob_long)
   372  print (year_ob_i(year_ob_long))
   373 
   374 
   375  field   = (/"NEE Flux" \
   376             ,"Net Radiation" \
   377             ,"Latent Heat" \
   378             ,"Sensible Heat" \
   379             ,"GPP Flux" \
   380             ,"Respiration" \
   381             /)
   382 
   383  field_unit = (/"u mol/m2/s" \
   384                ,"W/m2" \
   385                ,"W/m2" \
   386                ,"W/m2" \
   387                ,"u mol/m2/s" \
   388                ,"u mol/m2/s" \
   389                /)
   390 
   391 ;nstation  = dimsizes(station)
   392  nstation  = dimsizes(year_ob_long)
   393 
   394  data_mod  = new ((/nstation, nfield, nmon/),float)
   395  data_ob   = new ((/nstation, nfield, nmon/),float)
   396  lat_ob    = new ((/nstation/),float)
   397  lon_ob    = new ((/nstation/),float)
   398  unit_ob   = new ((/nfield/),string)
   399 
   400  diro_root  = "/fis/cgd/cseg/people/jeff/clamp/ameriflux/data/"
   401  dirm_root  = "/fis/cgd/cseg/people/jeff/clamp_data/model/"
   402 
   403  do n = 0,nstation-1
   404 
   405 ;-------------------------------------------------
   406 ;   get ob data
   407 
   408 ;   nn = n
   409     nn = year_ob_long(n)
   410 
   411     diro = diro_root + station(nn)+"/"
   412     filo = year_ob_i(nn)+"-"+year_ob_f(nn)+"_L4_m.nc"
   413     fo   = addfile (diro+filo,"r")
   414 
   415     print (filo)
   416  
   417     lon_ob(n) = fo->lon 
   418     lat_ob(n) = fo->lat
   419 
   420     data      = fo->NEE_or_fMDS
   421     data_ob(n,0,:) = dim_avg(data(month|:,year|:))
   422     delete (data)
   423 
   424     data      = fo->Rg_f
   425     data_ob(n,1,:) = dim_avg(data(month|:,year|:))
   426     delete (data)
   427 
   428     data      = fo->LE_f
   429     data_ob(n,2,:) = dim_avg(data(month|:,year|:))
   430     delete (data)
   431 
   432     data      = fo->H_f
   433     data_ob(n,3,:) = dim_avg(data(month|:,year|:))
   434     delete (data)
   435 
   436     data      = fo->GPP_or_MDS
   437     data_ob(n,4,:) = dim_avg(data(month|:,year|:))
   438     delete (data)
   439 
   440     data      = fo->Reco_or
   441     data_ob(n,5,:) = dim_avg(data(month|:,year|:))
   442     delete (data)
   443 
   444     delete (fo)
   445 ;---------------------------------------------------
   446 ;   get model data
   447 
   448 ;   film = model_name+"_"+ year_ob(n)+"_MONS_climo.nc"
   449     film = model_name+"_"+"1990-2004"+"_MONS_climo.nc"
   450     fm   = addfile (dirm_root+film,"r")
   451 
   452 ;   print (film)
   453 
   454 if (ENERGY .eq. "old") then
   455 
   456   data = fm->NEE
   457   data_mod0(0,:,:,:) = data(:,:,:) * factor
   458   delete (data)
   459 
   460 ; data  = fm->LATENT
   461   data1 = fm->FCEV
   462   data2 = fm->FCTR
   463   data3 = fm->FGEV
   464   data_mod0(2,:,:,:) = data1(:,:,:)+data2(:,:,:)+data3(:,:,:) 
   465   delete (data1)
   466   delete (data2)
   467   delete (data3)
   468 
   469 ; data = fm->SENSIBLE
   470   data  = fm->FSH
   471   data_mod0(3,:,:,:) = data(:,:,:) 
   472   delete (data)
   473 
   474 ; data  = fm->NETRAD
   475   data1 = fm->FSA
   476   data2 = fm->FIRA
   477   data_mod0(1,:,:,:) = data1(:,:,:)-data2(:,:,:)-data_mod0(2,:,:,:)-data_mod0(3,:,:,:) 
   478   delete (data1)
   479   delete (data2)
   480 
   481 else
   482 
   483   data = fm->NEE
   484   data_mod0(0,:,:,:) = data(:,:,:) * factor
   485   delete (data)
   486 
   487   data = fm->NETRAD
   488   data_mod0(1,:,:,:) = data(:,:,:) 
   489   delete (data)
   490 
   491   data = fm->LATENT
   492   data_mod0(2,:,:,:) = data(:,:,:) 
   493   delete (data)
   494 
   495 ; data = fm->SENSIBLE
   496   data = fm->FSH
   497   data_mod0(3,:,:,:) = data(:,:,:) 
   498   delete (data)
   499 end if
   500 
   501   data = fm->GPP
   502   data_mod0(4,:,:,:) = data(:,:,:) * factor 
   503   delete (data)
   504 
   505   if (model .eq. "cn") then
   506      data = fm->ER
   507   else
   508      data1 = fm->AR
   509      data2 = fm->HR
   510      data  = data1 + data2
   511     
   512      delete (data1)
   513      delete (data2)
   514   end if
   515 
   516   data_mod0(5,:,:,:) = data(:,:,:) * factor
   517   delete (data)
   518 
   519   delete (fm) 
   520 
   521 ;************************************************************
   522 ; interpolate model data into observed station
   523 ; note: model is 0-360E, 90S-90N
   524 ;************************************************************
   525 
   526 ; to be able to handle observation at (-89.98,-24.80)
   527   ym(0) = -90.  
   528 
   529   yy = linint2_points_Wrap(xm,ym,data_mod0,True,lon_ob(n),lat_ob(n),0)
   530 
   531 ; print (yy)
   532  
   533   data_mod(n,:,:) = yy(:,:,0)
   534 
   535   delete (yy)
   536 
   537  end do
   538 ;************************************************************
   539 ; compute correlation coef and M score
   540 ;************************************************************
   541 
   542  score_max = 5.
   543 
   544  ccr     = new ((/nstation, nfield/),float)
   545  M_score = new ((/nstation, nfield/),float) 
   546 
   547  do n=0,nstation-1
   548  do m=0,nfield-1   
   549     ccr(n,m) = esccr(data_ob(n,m,:),data_mod(n,m,:),0)
   550     bias = sum(abs(data_mod(n,m,:)-data_ob(n,m,:))/(abs(data_mod(n,m,:))+abs(data_ob(n,m,:))))
   551     M_score(n,m) = (1. -(bias/nmon)) * score_max
   552  end do
   553  end do
   554 
   555  M_co2 = avg(M_score(:,0))
   556  M_rad = avg(M_score(:,1))
   557  M_lh  = avg(M_score(:,2))
   558  M_sh  = avg(M_score(:,3))
   559  M_gpp = avg(M_score(:,4))
   560  M_er  = avg(M_score(:,5))
   561  M_all = M_co2+ M_rad +M_lh + M_sh + M_gpp + M_er
   562 
   563  M_energy_co2 = sprintf("%.2f", M_co2)
   564  M_energy_rad = sprintf("%.2f", M_rad)
   565  M_energy_lh  = sprintf("%.2f", M_lh )
   566  M_energy_sh  = sprintf("%.2f", M_sh )
   567  M_energy_gpp = sprintf("%.2f", M_gpp)
   568  M_energy_er  = sprintf("%.2f", M_er )
   569  M_energy_all = sprintf("%.2f", M_all)
   570 
   571 ;*******************************************************************
   572 ; for station line plot
   573 ;*******************************************************************
   574 
   575 ; for x-axis in xyplot
   576   mon = ispan(1,12,1)
   577   mon@long_name = "month"
   578 
   579   res                   = True               ; plot mods desired
   580   res@xyLineThicknesses = (/2.0,2.0/)        ; make 2nd lines thicker
   581   res@xyLineColors      = (/"blue","red"/)   ; line color (ob,model)
   582 ;-------------------------------------------------------------------------
   583 ; Add a boxed legend using the more simple method
   584 
   585   res@pmLegendDisplayMode    = "Always"
   586 ; res@pmLegendWidthF         = 0.1
   587   res@pmLegendWidthF         = 0.08
   588   res@pmLegendHeightF        = 0.06
   589 ; res@pmLegendOrthogonalPosF = -1.17
   590 ; res@pmLegendOrthogonalPosF = -1.00  ;(downward)
   591   res@pmLegendOrthogonalPosF = -0.30  ;(downward)
   592 
   593 ; res@pmLegendParallelPosF   =  0.18
   594   res@pmLegendParallelPosF   =  0.23  ;(rightward)
   595 
   596 ; res@lgPerimOn             = False
   597   res@lgLabelFontHeightF     = 0.015
   598   res@xyExplicitLegendLabels = (/"observed",model_name/)
   599 ;-------------------------------------------------------------------
   600 ; for panel plot
   601   res@gsnFrame     = False                   ; Do not draw plot 
   602   res@gsnDraw      = False                   ; Do not advance frame
   603 
   604   pres                            = True     ; panel plot mods desired
   605   pres@gsnPanelYWhiteSpacePercent = 5        ; increase white space around
   606                                              ; indiv. plots in panel
   607   pres@gsnMaximize                = True     ; fill the page
   608 ;-------------------------------------------------------------------
   609 
   610   plot_data   = new((/2,12/),float)
   611   plot_data!0 = "case"
   612   plot_data!1 = "month"
   613 
   614   do n = 0,nstation-1
   615 
   616 ;    nn = n
   617      nn = year_ob_long(n)
   618 
   619 ;----------------------------
   620 ; for observed
   621 
   622     plot_name = station(nn)+"_ob"    
   623     title = station(nn)+"("+sprintf("%5.2f",lat_ob(n))+","+sprintf("%5.2f",lon_ob(n))+")"
   624     res@tiMainString = title
   625 
   626     wks = gsn_open_wks (plot_type,plot_name)
   627     plot=new(nfield,graphic)                        ; create graphic array   
   628 
   629     do i = 0,nfield-1                           
   630        plot_data(0,:) = (/data_ob (n,i,:)/)
   631        plot_data@long_name = field(i)+" ("+field_unit(i)+")"   
   632        plot(i)=gsn_csm_xy(wks,mon,plot_data(0,:),res)    ; create plot 
   633     end do
   634 
   635     gsn_panel(wks,plot,(/3,2/),pres)                 ; create panel plot
   636 
   637     system("convert "+plot_name+"."+plot_type+" "+plot_name+"."+plot_type_new+";"+ \
   638            "rm "+plot_name+"."+plot_type)
   639 
   640     clear (wks)  
   641     delete (plot)
   642 ;----------------------------
   643 ; for model_vs_ob
   644 
   645     plot_name = station(nn)+"_model_vs_ob"
   646     title = station(nn)+"("+sprintf("%5.2f",lat_ob(n))+","+sprintf("%5.2f",lon_ob(n))+")"    
   647     res@tiMainString = title
   648 
   649     wks = gsn_open_wks (plot_type,plot_name)
   650     plot=new(nfield,graphic)                         ; create graphic array   
   651 
   652     do i = 0,nfield-1                           
   653        plot_data(0,:) = (/data_ob (n,i,:)/)
   654        plot_data(1,:) = (/data_mod(n,i,:)/)
   655        plot_data@long_name = field(i)+" ("+field_unit(i)+")"   
   656        plot(i)=gsn_csm_xy(wks,mon,plot_data,res)     ; create plot 
   657     end do
   658    
   659     gsn_panel(wks,plot,(/3,2/),pres)                 ; create panel plot
   660 
   661     system("convert "+plot_name+"."+plot_type+" "+plot_name+"."+plot_type_new+";"+ \
   662            "rm "+plot_name+"."+plot_type)
   663 
   664     clear (wks)  
   665     delete (plot)
   666  end do
   667 
   668 ;*******************************************************************
   669 ; html table of site: observed
   670 ;*******************************************************************
   671   output_html = "line_ob.html"
   672 
   673   header = (/"<HTML>" \
   674             ,"<HEAD>" \
   675             ,"<TITLE>CLAMP metrics</TITLE>" \
   676             ,"</HEAD>" \
   677             ,"<H1>Energy at Site: Observation</H1>" \
   678             /) 
   679   footer = "</HTML>"
   680 
   681   table_header = (/ \
   682         "<table border=1 cellspacing=0 cellpadding=3 width=60%>" \
   683        ,"<tr>" \
   684        ,"   <th bgcolor=DDDDDD >Site Name</th>" \
   685        ,"   <th bgcolor=DDDDDD >Latitude</th>" \
   686        ,"   <th bgcolor=DDDDDD >Longitude</th>" \
   687        ,"   <th bgcolor=DDDDDD >Observed</th>" \ 
   688        ,"</tr>" \
   689        /)
   690   table_footer = "</table>"
   691   row_header = "<tr>"
   692   row_footer = "</tr>"
   693 
   694   lines = new(50000,string)
   695   nline = 0
   696 
   697   set_line(lines,nline,header)
   698   set_line(lines,nline,table_header)
   699 ;-----------------------------------------------
   700 ; row of table
   701   
   702   do n = 0,nstation-1
   703 
   704 ;    nn = n
   705      nn = year_ob_long(n)
   706 
   707      set_line(lines,nline,row_header)
   708 
   709      txt0 = station(nn)
   710      txt1 = sprintf("%5.2f", lat_ob(n))
   711      txt2 = sprintf("%5.2f", lon_ob(n))
   712      txt3 = year_ob(nn)
   713 
   714      set_line(lines,nline,"<th><a href="+txt0+"_ob.png>"+txt0+"</a></th>")
   715      set_line(lines,nline,"<th>"+txt1+"</th>")
   716      set_line(lines,nline,"<th>"+txt2+"</th>")
   717      set_line(lines,nline,"<th>"+txt3+"</th>")
   718 
   719      set_line(lines,nline,row_footer)
   720   end do
   721 ;-----------------------------------------------
   722   set_line(lines,nline,table_footer)
   723   set_line(lines,nline,footer) 
   724 
   725 ; Now write to an HTML file.
   726   idx = ind(.not.ismissing(lines))
   727   if(.not.any(ismissing(idx))) then
   728     asciiwrite(output_html,lines(idx))
   729   else
   730    print ("error?")
   731   end if
   732   delete (idx)
   733 
   734 ;*******************************************************************
   735 ; score and line table : model vs observed
   736 ;*******************************************************************
   737   output_html = "score+line_vs_ob.html"
   738 
   739   header = (/"<HTML>" \
   740             ,"<HEAD>" \
   741             ,"<TITLE>CLAMP metrics</TITLE>" \
   742             ,"</HEAD>" \
   743             ,"<H1>Energy at Site: Model "+model_name+"</H1>" \
   744             /) 
   745   footer = "</HTML>"
   746 
   747   delete (table_header)
   748   table_header = (/ \
   749         "<table border=1 cellspacing=0 cellpadding=3 width=100%>" \
   750        ,"<tr>" \
   751        ,"   <th bgcolor=DDDDDD >Site Name</th>" \
   752        ,"   <th bgcolor=DDDDDD >Latitude</th>" \
   753        ,"   <th bgcolor=DDDDDD >Longitude</th>" \
   754        ,"   <th bgcolor=DDDDDD >Observed</th>" \
   755        ,"   <th bgcolor=DDDDDD >CO2 Flux</th>" \
   756        ,"   <th bgcolor=DDDDDD >Net Radiation</th>" \
   757        ,"   <th bgcolor=DDDDDD >Latent Heat</th>" \
   758        ,"   <th bgcolor=DDDDDD >Sensible Heat</th>" \
   759        ,"   <th bgcolor=DDDDDD >GPP Glux</th>" \
   760        ,"   <th bgcolor=DDDDDD >Respiration</th>" \
   761        ,"   <th bgcolor=DDDDDD >Average</th>" \
   762        ,"</tr>" \
   763        /)
   764   table_footer = "</table>"
   765   row_header = "<tr>"
   766   row_footer = "</tr>"
   767 
   768   lines = new(50000,string)
   769   nline = 0
   770 
   771   set_line(lines,nline,header)
   772   set_line(lines,nline,table_header)
   773 ;-----------------------------------------------
   774 ; row of table
   775   
   776   do n = 0,nstation-1
   777 
   778 ;    nn = n
   779      nn = year_ob_long(n)
   780 
   781      set_line(lines,nline,row_header)
   782 
   783      txt0  = station(nn)
   784      txt1  = sprintf("%5.2f", lat_ob(n))
   785      txt2  = sprintf("%5.2f", lon_ob(n))
   786      txt3  = year_ob(nn)
   787      txt4  = sprintf("%5.2f", M_score(n,0))
   788      txt5  = sprintf("%5.2f", M_score(n,1))
   789      txt6  = sprintf("%5.2f", M_score(n,2))
   790      txt7  = sprintf("%5.2f", M_score(n,3))
   791      txt8  = sprintf("%5.2f", M_score(n,4))
   792      txt9  = sprintf("%5.2f", M_score(n,5))
   793      txt10 = sprintf("%5.2f", avg(M_score(n,:)))
   794 
   795      set_line(lines,nline,"<th><a href="+txt0+"_model_vs_ob.png>"+txt0+"</a></th>")
   796      set_line(lines,nline,"<th>"+txt1+"</th>")
   797      set_line(lines,nline,"<th>"+txt2+"</th>")
   798      set_line(lines,nline,"<th>"+txt3+"</th>")
   799      set_line(lines,nline,"<th>"+txt4+"</th>")
   800      set_line(lines,nline,"<th>"+txt5+"</th>")
   801      set_line(lines,nline,"<th>"+txt6+"</th>")
   802      set_line(lines,nline,"<th>"+txt7+"</th>")
   803      set_line(lines,nline,"<th>"+txt8+"</th>")
   804      set_line(lines,nline,"<th>"+txt9+"</th>")
   805      set_line(lines,nline,"<th>"+txt10+"</th>")
   806 
   807      set_line(lines,nline,row_footer)
   808   end do
   809 
   810 ; last row, summary
   811   set_line(lines,nline,row_header)
   812 
   813   txt0  = "All_"+sprintf("%.0f", nstation)
   814   txt1  = "-"
   815   txt2  = "-"
   816   txt3  = "-"
   817   txt4  = M_energy_co2
   818   txt5  = M_energy_rad
   819   txt6  = M_energy_lh
   820   txt7  = M_energy_sh
   821   txt8  = M_energy_gpp
   822   txt9  = M_energy_er
   823   txt10 = M_energy_all
   824 
   825   set_line(lines,nline,"<th>"+txt0+"</th>")
   826   set_line(lines,nline,"<th>"+txt1+"</th>")
   827   set_line(lines,nline,"<th>"+txt2+"</th>")
   828   set_line(lines,nline,"<th>"+txt3+"</th>")
   829   set_line(lines,nline,"<th>"+txt4+"</th>")
   830   set_line(lines,nline,"<th>"+txt5+"</th>")
   831   set_line(lines,nline,"<th>"+txt6+"</th>")
   832   set_line(lines,nline,"<th>"+txt7+"</th>")
   833   set_line(lines,nline,"<th>"+txt8+"</th>")
   834   set_line(lines,nline,"<th>"+txt9+"</th>")
   835   set_line(lines,nline,"<th>"+txt10+"</th>")
   836 
   837   set_line(lines,nline,row_footer)
   838 ;-----------------------------------------------
   839   set_line(lines,nline,table_footer)
   840   set_line(lines,nline,footer) 
   841 
   842 ; Now write to an HTML file.
   843   idx = ind(.not.ismissing(lines))
   844   if(.not.any(ismissing(idx))) then
   845     asciiwrite(output_html,lines(idx))
   846   else
   847    print ("error?")
   848   end if
   849   delete (idx)
   850 
   851 ;***************************************************************************
   852 ; output plots
   853 ;***************************************************************************
   854   output_dir = model_name+"/ameriflux"
   855 
   856   system("mv *.png *.html " + output_dir) 
   857 ;***************************************************************************
   858 end