all/run_2-model.csh
changeset 0 0c6405ab2ff4
child 1 4be95183fbcd
equal deleted inserted replaced
-1:000000000000 0:ea7235f386a2
       
     1 #!/bin/csh -f
       
     2 #-------------------------------------------------------------------
       
     3 # note: user modifies ONLY the "user modification" section 
       
     4 #
       
     5 #       COMPARE: model1 vs model2
       
     6 #       MODELn : model name
       
     7 #       DIR_M  : directory of model data
       
     8 #       DIR_O  : directory of observed data
       
     9 #       DIR_S  : directory of model surface data
       
    10 #       DIR_SCRIPTS  : directory of run scripts
       
    11 #       FILE1  : time_mean  climatology from CLM diagnostic package
       
    12 #       FILE2  : 12-monthly climatology from CLM diagnostic package
       
    13 #       FILE3  : 12-monthly climatology from ATM diagnostic package
       
    14 #                leave it blank, if no ATM file:
       
    15 #                set FILE3 =
       
    16 #       FILE7 : timeseries file generated from .... 
       
    17 #       FILE8 : timeseries file generated from .... 
       
    18 #       GRID   : T31, T42, or 1.9
       
    19 #       BGC    : cn or casa 
       
    20 #       ENERGY : new or old (fields in model data)
       
    21 #-------------------------------------------------------------------
       
    22 
       
    23 #*******************************************************
       
    24 # user modification-(1)
       
    25 
       
    26 # directory name of model comparison
       
    27 #et COMPARE = b30.061n_vs_b30.061m
       
    28 set COMPARE = CN_vs_CASA 
       
    29 
       
    30 #*******************************************************
       
    31 # user modification-(2)
       
    32 
       
    33 # model1 
       
    34 set MODEL1 = CN
       
    35 set DIR_M  = /lustre/wolf-ddn/scratch/hof/clamp_data/model/
       
    36 set FILE1  = i01.10cn_1948-2004_ANN_climo.nc
       
    37 set FILE2  = i01.10cn_1948-2004_MONS_climo.nc
       
    38 set FILE3  = f02.03cn_1901-1925_MONS_climo_atm.nc
       
    39 set FILE4  = i01.06cn_1980-2004_ANN_climo.nc
       
    40 set FILE5  = i01.10cn_1990-2004_ANN_climo.nc
       
    41 set FILE6  = i01.07cn_1990-2004_ANN_climo.nc
       
    42 set FILE7  = i01.10cn_Fire_C_1979-2004_monthly.nc
       
    43 set FILE8  = i01.10cn_ameriflux_1990-2004_monthly.nc 
       
    44 set GRID   = T42
       
    45 set BGC    = cn
       
    46 set ENERGY = new
       
    47 
       
    48 # in the "CLAMP metric processing" section:
       
    49 #  only 00.initial.ncl and 99.final.ncl are required,
       
    50 #  user can comment out any one or more of the other ncl scripts,
       
    51 #  e.g. 
       
    52 #  #ncl $INPUT_TEXT $DIR_SCRIPTS/10.fire.ncl
       
    53 
       
    54 # model surface data
       
    55 set DIR_S  = /lustre/wolf-ddn/scratch/hof/clamp_data/surface_model/
       
    56 
       
    57 # observed data
       
    58 set DIR_O  = /lustre/wolf-ddn/scratch/hof/clamp_data/observed/
       
    59 
       
    60 # directory for scripts, templates and ncl files
       
    61 set DIR_SCRIPTS = /lustre/wolf-ddn/scratch/hof/clamp/all/
       
    62 
       
    63 #********************************************************
       
    64 
       
    65 # create model1 and model1_vs_model2 directory by copying templates
       
    66 if ($FILE3 != "") then
       
    67    set TEMPLATE1 = template_1-model
       
    68    set TEMPLATE2 = template_2-model
       
    69 else
       
    70    set TEMPLATE1 = template_1-model_noCO2
       
    71    set TEMPLATE2 = template_2-model_noCO2
       
    72 endif
       
    73 cp -r $DIR_SCRIPTS/$TEMPLATE1 $MODEL1
       
    74 cp -r $DIR_SCRIPTS/$TEMPLATE2 $COMPARE
       
    75 
       
    76 # add quote, to be usesd in INPUT_TEXT
       
    77 set MODELQ = \"$MODEL1\"
       
    78 set DIRMQ  = \"$DIR_M\"
       
    79 set F1  = \"$FILE1\"
       
    80 set F2  = \"$FILE2\"
       
    81 set F3  = \"$FILE3\"
       
    82 set F4  = \"$FILE4\"
       
    83 set F5  = \"$FILE5\"
       
    84 set F6  = \"$FILE6\"
       
    85 set F7  = \"$FILE7\"
       
    86 set F8  = \"$FILE8\"
       
    87 set GRIDQ   = \"$GRID\"
       
    88 set BGCQ    = \"$BGC\"
       
    89 set ENERGYQ = \"$ENERGY\"
       
    90 set DIRSQ   = \"$DIR_S\"
       
    91 set DIROQ   = \"$DIR_O\"
       
    92 set DIRCQ   = \"$DIR_SCRIPTS\"
       
    93 
       
    94 set COMPAREQ = \"$COMPARE\"
       
    95 set MODELN   = \"model1\"
       
    96 
       
    97 set INPUT_TEXT = "model_name=$MODELQ model_grid=$GRIDQ dirm=$DIRMQ film1=$F1 film2=$F2 film3=$F3 film4=$F4 film5=$F5 film6=$F6 film7=$F7 film8=$F8 BGC=$BGCQ ENERGY=$ENERGYQ dirs=$DIRSQ diro=$DIROQ dirscript=$DIRCQ modeln=$MODELN compare=$COMPAREQ"
       
    98  
       
    99 # CLAMP metric processing of model1
       
   100 ncl $INPUT_TEXT $DIR_SCRIPTS/00.initial.ncl
       
   101 ncl $INPUT_TEXT $DIR_SCRIPTS/01.npp.ncl
       
   102 ncl $INPUT_TEXT $DIR_SCRIPTS/02.lai.ncl
       
   103 
       
   104 if ($FILE3 != "") then
       
   105 ncl $INPUT_TEXT $DIR_SCRIPTS/03.co2.ncl
       
   106 endif
       
   107 
       
   108 ncl $INPUT_TEXT $DIR_SCRIPTS/04.biomass.ncl
       
   109 ncl $INPUT_TEXT $DIR_SCRIPTS/06.fluxnet.ncl
       
   110 ncl $INPUT_TEXT $DIR_SCRIPTS/07.beta.ncl
       
   111 ncl $INPUT_TEXT $DIR_SCRIPTS/08.turnover.ncl
       
   112 
       
   113 if ($BGC != "casa") then
       
   114 ncl $INPUT_TEXT $DIR_SCRIPTS/09.carbon_sink.ncl
       
   115 else
       
   116 ncl $INPUT_TEXT $DIR_SCRIPTS/09x.carbon_sink.ncl
       
   117 endif
       
   118 
       
   119 if ($BGC != "casa") then
       
   120 ncl $INPUT_TEXT $DIR_SCRIPTS/10.fire.ncl
       
   121 endif
       
   122 
       
   123 ncl $INPUT_TEXT $DIR_SCRIPTS/11.ameriflux.ncl
       
   124 ncl $INPUT_TEXT $DIR_SCRIPTS/99.final.ncl
       
   125 
       
   126 #*******************************************************
       
   127 # user modification-(3)
       
   128 
       
   129 # model2
       
   130 set MODEL2 = CASA
       
   131 set DIR_M  = /lustre/wolf-ddn/scratch/hof/clamp_data/model/
       
   132 set FILE1  = i01.10casa_1948-2004_ANN_climo.nc
       
   133 set FILE2  = i01.10casa_1948-2004_MONS_climo.nc
       
   134 set FILE3  = f02.03casa_1876-1900_MONS_climo_atm.nc
       
   135 set FILE4  = i01.06casa_1980-2004_ANN_climo.nc
       
   136 set FILE5  = i01.10casa_1990-2004_ANN_climo.nc
       
   137 set FILE6  = i01.07casa_1990-2004_ANN_climo.nc
       
   138 set FILE7  = i01.10casa_Fire_C_1979-2004_monthly.nc
       
   139 set FILE8  = i01.10casa_ameriflux_1990-2004_monthly.nc
       
   140 set GRID   = T42
       
   141 set BGC    = casa
       
   142 set ENERGY = new
       
   143 #*******************************************************
       
   144 # create model2 directory by copying templates
       
   145 if ($FILE3 != "") then
       
   146    set TEMPLATE1 = template_1-model
       
   147 else
       
   148    set TEMPLATE1 = template_1-model_noCO2
       
   149 endif
       
   150 cp -r $DIR_SCRIPTS/$TEMPLATE1 $MODEL2
       
   151 
       
   152 # add quote, to be usesd in INPUT_TEXT
       
   153 set MODELQ  = \"$MODEL2\"
       
   154 set DIRMQ   = \"$DIR_M\"
       
   155 set F1  = \"$FILE1\"
       
   156 set F2  = \"$FILE2\"
       
   157 set F3  = \"$FILE3\"
       
   158 set F4  = \"$FILE4\"
       
   159 set F5  = \"$FILE5\"
       
   160 set F6  = \"$FILE6\"
       
   161 set F7  = \"$FILE7\"
       
   162 set F8  = \"$FILE8\"
       
   163 set GRIDQ   = \"$GRID\"
       
   164 set BGCQ    = \"$BGC\"
       
   165 set ENERGYQ = \"$ENERGY\"
       
   166 
       
   167 set COMPAREQ = \"$COMPARE\"
       
   168 set MODELN   = \"model2\"
       
   169 
       
   170 set INPUT_TEXT = "model_name=$MODELQ model_grid=$GRIDQ dirm=$DIRMQ film1=$F1 film2=$F2 film3=$F3 film4=$F4 film5=$F5 film6=$F6 film7=$F7 film8=$F8 BGC=$BGCQ ENERGY=$ENERGYQ dirs=$DIRSQ diro=$DIROQ dirscript=$DIRCQ modeln=$MODELN compare=$COMPAREQ"
       
   171  
       
   172 # CLAMP metric processing of model2
       
   173 ncl $INPUT_TEXT $DIR_SCRIPTS/00.initial.ncl
       
   174 ncl $INPUT_TEXT $DIR_SCRIPTS/01.npp.ncl
       
   175 ncl $INPUT_TEXT $DIR_SCRIPTS/02.lai.ncl
       
   176 
       
   177 if ($FILE3 != "") then
       
   178 ncl $INPUT_TEXT $DIR_SCRIPTS/03.co2.ncl
       
   179 endif
       
   180 
       
   181 ncl $INPUT_TEXT $DIR_SCRIPTS/04.biomass.ncl
       
   182 ncl $INPUT_TEXT $DIR_SCRIPTS/06.fluxnet.ncl
       
   183 ncl $INPUT_TEXT $DIR_SCRIPTS/07.beta.ncl
       
   184 ncl $INPUT_TEXT $DIR_SCRIPTS/08.turnover.ncl
       
   185 
       
   186 if ($BGC != "casa") then
       
   187 ncl $INPUT_TEXT $DIR_SCRIPTS/09.carbon_sink.ncl
       
   188 else
       
   189 ncl $INPUT_TEXT $DIR_SCRIPTS/09x.carbon_sink.ncl
       
   190 endif
       
   191 
       
   192 if ($BGC != "casa") then
       
   193 ncl $INPUT_TEXT $DIR_SCRIPTS/10.fire.ncl
       
   194 endif
       
   195 
       
   196 ncl $INPUT_TEXT $DIR_SCRIPTS/11.ameriflux.ncl
       
   197 ncl $INPUT_TEXT $DIR_SCRIPTS/99.final.ncl
       
   198 
       
   199 # create a tar file from the final output
       
   200 tar cf - $MODEL1 $MODEL2 $COMPARE > all.tar
       
   201