all/run_2-model.csh
author Forrest Hoffman <forrest@climatemodeling.org>
Mon, 26 Jan 2009 22:08:20 -0500
changeset 0 0c6405ab2ff4
child 1 4be95183fbcd
permissions -rwxr-xr-x
Initial commit of C-LAMP Diagnostics from Jeff Lee
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#!/bin/csh -f
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#-------------------------------------------------------------------
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# note: user modifies ONLY the "user modification" section 
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#
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#       COMPARE: model1 vs model2
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#       MODELn : model name
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#       DIR_M  : directory of model data
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#       DIR_O  : directory of observed data
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#       DIR_S  : directory of model surface data
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#       DIR_SCRIPTS  : directory of run scripts
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#       FILE1  : time_mean  climatology from CLM diagnostic package
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#       FILE2  : 12-monthly climatology from CLM diagnostic package
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#       FILE3  : 12-monthly climatology from ATM diagnostic package
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#                leave it blank, if no ATM file:
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#                set FILE3 =
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#       FILE7 : timeseries file generated from .... 
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#       FILE8 : timeseries file generated from .... 
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#       GRID   : T31, T42, or 1.9
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#       BGC    : cn or casa 
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#       ENERGY : new or old (fields in model data)
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#-------------------------------------------------------------------
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#*******************************************************
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# user modification-(1)
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# directory name of model comparison
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#et COMPARE = b30.061n_vs_b30.061m
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set COMPARE = CN_vs_CASA 
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#*******************************************************
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# user modification-(2)
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# model1 
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set MODEL1 = CN
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set DIR_M  = /lustre/wolf-ddn/scratch/hof/clamp_data/model/
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set FILE1  = i01.10cn_1948-2004_ANN_climo.nc
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set FILE2  = i01.10cn_1948-2004_MONS_climo.nc
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set FILE3  = f02.03cn_1901-1925_MONS_climo_atm.nc
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set FILE4  = i01.06cn_1980-2004_ANN_climo.nc
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set FILE5  = i01.10cn_1990-2004_ANN_climo.nc
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set FILE6  = i01.07cn_1990-2004_ANN_climo.nc
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set FILE7  = i01.10cn_Fire_C_1979-2004_monthly.nc
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set FILE8  = i01.10cn_ameriflux_1990-2004_monthly.nc 
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set GRID   = T42
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set BGC    = cn
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set ENERGY = new
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# in the "CLAMP metric processing" section:
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#  only 00.initial.ncl and 99.final.ncl are required,
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#  user can comment out any one or more of the other ncl scripts,
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#  e.g. 
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#  #ncl $INPUT_TEXT $DIR_SCRIPTS/10.fire.ncl
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# model surface data
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set DIR_S  = /lustre/wolf-ddn/scratch/hof/clamp_data/surface_model/
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# observed data
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set DIR_O  = /lustre/wolf-ddn/scratch/hof/clamp_data/observed/
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# directory for scripts, templates and ncl files
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set DIR_SCRIPTS = /lustre/wolf-ddn/scratch/hof/clamp/all/
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#********************************************************
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# create model1 and model1_vs_model2 directory by copying templates
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if ($FILE3 != "") then
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   set TEMPLATE1 = template_1-model
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   set TEMPLATE2 = template_2-model
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else
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   set TEMPLATE1 = template_1-model_noCO2
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   set TEMPLATE2 = template_2-model_noCO2
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endif
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cp -r $DIR_SCRIPTS/$TEMPLATE1 $MODEL1
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cp -r $DIR_SCRIPTS/$TEMPLATE2 $COMPARE
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# add quote, to be usesd in INPUT_TEXT
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set MODELQ = \"$MODEL1\"
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set DIRMQ  = \"$DIR_M\"
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set F1  = \"$FILE1\"
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set F2  = \"$FILE2\"
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set F3  = \"$FILE3\"
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set F4  = \"$FILE4\"
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set F5  = \"$FILE5\"
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set F6  = \"$FILE6\"
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set F7  = \"$FILE7\"
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set F8  = \"$FILE8\"
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set GRIDQ   = \"$GRID\"
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set BGCQ    = \"$BGC\"
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set ENERGYQ = \"$ENERGY\"
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set DIRSQ   = \"$DIR_S\"
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set DIROQ   = \"$DIR_O\"
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set DIRCQ   = \"$DIR_SCRIPTS\"
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set COMPAREQ = \"$COMPARE\"
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set MODELN   = \"model1\"
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set INPUT_TEXT = "model_name=$MODELQ model_grid=$GRIDQ dirm=$DIRMQ film1=$F1 film2=$F2 film3=$F3 film4=$F4 film5=$F5 film6=$F6 film7=$F7 film8=$F8 BGC=$BGCQ ENERGY=$ENERGYQ dirs=$DIRSQ diro=$DIROQ dirscript=$DIRCQ modeln=$MODELN compare=$COMPAREQ"
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# CLAMP metric processing of model1
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ncl $INPUT_TEXT $DIR_SCRIPTS/00.initial.ncl
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ncl $INPUT_TEXT $DIR_SCRIPTS/01.npp.ncl
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ncl $INPUT_TEXT $DIR_SCRIPTS/02.lai.ncl
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if ($FILE3 != "") then
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ncl $INPUT_TEXT $DIR_SCRIPTS/03.co2.ncl
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endif
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ncl $INPUT_TEXT $DIR_SCRIPTS/04.biomass.ncl
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ncl $INPUT_TEXT $DIR_SCRIPTS/06.fluxnet.ncl
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ncl $INPUT_TEXT $DIR_SCRIPTS/07.beta.ncl
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ncl $INPUT_TEXT $DIR_SCRIPTS/08.turnover.ncl
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if ($BGC != "casa") then
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ncl $INPUT_TEXT $DIR_SCRIPTS/09.carbon_sink.ncl
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else
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ncl $INPUT_TEXT $DIR_SCRIPTS/09x.carbon_sink.ncl
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endif
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if ($BGC != "casa") then
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ncl $INPUT_TEXT $DIR_SCRIPTS/10.fire.ncl
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endif
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ncl $INPUT_TEXT $DIR_SCRIPTS/11.ameriflux.ncl
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ncl $INPUT_TEXT $DIR_SCRIPTS/99.final.ncl
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#*******************************************************
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# user modification-(3)
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# model2
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set MODEL2 = CASA
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set DIR_M  = /lustre/wolf-ddn/scratch/hof/clamp_data/model/
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set FILE1  = i01.10casa_1948-2004_ANN_climo.nc
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set FILE2  = i01.10casa_1948-2004_MONS_climo.nc
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set FILE3  = f02.03casa_1876-1900_MONS_climo_atm.nc
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set FILE4  = i01.06casa_1980-2004_ANN_climo.nc
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set FILE5  = i01.10casa_1990-2004_ANN_climo.nc
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set FILE6  = i01.07casa_1990-2004_ANN_climo.nc
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set FILE7  = i01.10casa_Fire_C_1979-2004_monthly.nc
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set FILE8  = i01.10casa_ameriflux_1990-2004_monthly.nc
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set GRID   = T42
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set BGC    = casa
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set ENERGY = new
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#*******************************************************
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# create model2 directory by copying templates
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if ($FILE3 != "") then
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   set TEMPLATE1 = template_1-model
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else
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   set TEMPLATE1 = template_1-model_noCO2
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endif
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cp -r $DIR_SCRIPTS/$TEMPLATE1 $MODEL2
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# add quote, to be usesd in INPUT_TEXT
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set MODELQ  = \"$MODEL2\"
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set DIRMQ   = \"$DIR_M\"
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set F1  = \"$FILE1\"
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set F2  = \"$FILE2\"
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set F3  = \"$FILE3\"
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set F4  = \"$FILE4\"
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set F5  = \"$FILE5\"
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set F6  = \"$FILE6\"
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set F7  = \"$FILE7\"
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set F8  = \"$FILE8\"
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set GRIDQ   = \"$GRID\"
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set BGCQ    = \"$BGC\"
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set ENERGYQ = \"$ENERGY\"
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set COMPAREQ = \"$COMPARE\"
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set MODELN   = \"model2\"
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set INPUT_TEXT = "model_name=$MODELQ model_grid=$GRIDQ dirm=$DIRMQ film1=$F1 film2=$F2 film3=$F3 film4=$F4 film5=$F5 film6=$F6 film7=$F7 film8=$F8 BGC=$BGCQ ENERGY=$ENERGYQ dirs=$DIRSQ diro=$DIROQ dirscript=$DIRCQ modeln=$MODELN compare=$COMPAREQ"
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# CLAMP metric processing of model2
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ncl $INPUT_TEXT $DIR_SCRIPTS/00.initial.ncl
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ncl $INPUT_TEXT $DIR_SCRIPTS/01.npp.ncl
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ncl $INPUT_TEXT $DIR_SCRIPTS/02.lai.ncl
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if ($FILE3 != "") then
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ncl $INPUT_TEXT $DIR_SCRIPTS/03.co2.ncl
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endif
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ncl $INPUT_TEXT $DIR_SCRIPTS/04.biomass.ncl
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ncl $INPUT_TEXT $DIR_SCRIPTS/06.fluxnet.ncl
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ncl $INPUT_TEXT $DIR_SCRIPTS/07.beta.ncl
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ncl $INPUT_TEXT $DIR_SCRIPTS/08.turnover.ncl
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if ($BGC != "casa") then
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ncl $INPUT_TEXT $DIR_SCRIPTS/09.carbon_sink.ncl
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else
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ncl $INPUT_TEXT $DIR_SCRIPTS/09x.carbon_sink.ncl
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endif
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if ($BGC != "casa") then
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ncl $INPUT_TEXT $DIR_SCRIPTS/10.fire.ncl
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endif
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ncl $INPUT_TEXT $DIR_SCRIPTS/11.ameriflux.ncl
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ncl $INPUT_TEXT $DIR_SCRIPTS/99.final.ncl
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# create a tar file from the final output
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tar cf - $MODEL1 $MODEL2 $COMPARE > all.tar
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