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ameriflux/23.plot.ncl
author Forrest Hoffman <forrest@climatemodeling.org>
Thu, 26 Mar 2009 14:02:21 -0400
changeset 1 4be95183fbcd
permissions -rw-r--r--
Modifications to scoring and graphics production for the final version of code for the C-LAMP paper in GCB. 
     1 ;************************************************************

     2 ; move data

     3 ; merge annual

     4 ; add table

     5 ; add time series plot

     6 ; sort by latitude in decending order (N->S)

     7 ; find year_ob >= 4

     8 ; add year_ob_i and year_ob_f

     9 ; change long_name

    10 ;************************************************************

    11 load "$NCARG_ROOT/lib/ncarg/nclscripts/csm/gsn_code.ncl"

    12 load "$NCARG_ROOT/lib/ncarg/nclscripts/csm/gsn_csm.ncl"

    13 load "$NCARG_ROOT/lib/ncarg/nclscripts/csm/contributed.ncl"

    14 ;************************************************************

    15 procedure set_line(lines:string,nline:integer,newlines:string) 

    16 begin

    17 ; add line to ascci/html file

    18     

    19   nnewlines = dimsizes(newlines)

    20   if(nline+nnewlines-1.ge.dimsizes(lines))

    21     print("set_line: bad index, not setting anything.") 

    22     return

    23   end if 

    24   lines(nline:nline+nnewlines-1) = newlines

    25 ;  print ("lines = " + lines(nline:nline+nnewlines-1))

    26   nline = nline + nnewlines

    27   return 

    28 end

    29 ;*************************************************************

    30 begin

    31 

    32   plot_type     = "ps"

    33   plot_type_new = "png"

    34 

    35 ;************************************************

    36 ; model data info

    37 ;************************************************

    38   model = "cn"

    39 ; model = "casa"

    40   

    41   model_name = "i01.10" + model

    42   

    43   ENERGY ="new"

    44 

    45   nmonth = 12

    46 

    47 ;************************************************

    48 ; observed data info

    49 ;************************************************

    50 

    51  station = (/"ARM_Oklahoma" \

    52             ,"ARM_Oklahoma_burn" \

    53             ,"ARM_Oklahoma_control" \

    54             ,"Atqasuk" \

    55             ,"Audubon" \

    56             ,"AustinCary" \

    57             ,"Bartlett" \

    58             ,"Bondville" \

    59             ,"Brookings" \

    60             ,"Donaldson" \

    61             ,"Duke_Forest_Hardwoods" \

    62             ,"Duke_Forest_Open_Field" \

    63             ,"Duke_Forest_Pine" \

    64             ,"Fermi_Ag" \

    65             ,"Fermi_Prairie" \

    66             ,"Flagstaff_Managed" \

    67             ,"Flagstaff_Unmanaged" \

    68             ,"Flagstaff_Wildfire" \

    69             ,"FortPeck" \

    70             ,"FreemanRanch_mesquite" \

    71             ,"Goodwin_Creek" \

    72             ,"HarvardForest" \

    73             ,"HarvardForestHemlock" \

    74             ,"HowlandForestMain" \

    75             ,"HowlandForestWest" \

    76             ,"Ivotuk" \

    77             ,"KendallGrasslands" \

    78             ,"KennedySpaceCenterPine" \

    79             ,"KennedySpaceCenterScrub" \

    80             ,"LittleProspect" \

    81             ,"LostCreek" \

    82             ,"Mead-irrigated" \

    83             ,"Mead-irrigated-rotation" \

    84             ,"Mead-rainfed" \

    85             ,"Metolius_2nd_YoungPonderosaPine" \

    86             ,"MetoliusEyerly" \

    87             ,"MetoliusIntermediatePine" \

    88             ,"MetoliusOldPonderosaPine" \

    89             ,"MissouriOzark" \

    90             ,"Mize" \

    91             ,"MorganMonroe" \

    92             ,"NiwotRidge" \

    93             ,"NorthCarolina_cc" \

    94             ,"NorthCarolina_lp" \

    95             ,"ParkFalls" \

    96             ,"Rayonier" \

    97             ,"SantaRita" \

    98             ,"SkyOaks_Old" \

    99             ,"SkyOaks_PostFire" \

   100             ,"SkyOaks_Young" \

   101             ,"SylvaniaWilderness" \

   102             ,"Toledo" \

   103             ,"Tonzi" \

   104             ,"UCI_1850" \

   105             ,"UCI_1930" \

   106             ,"UCI_1964" \

   107             ,"UCI_1964wet" \

   108             ,"UCI_1981" \

   109             ,"UCI_1989" \

   110             ,"UCI_1998" \

   111             ,"UMBS" \

   112             ,"Vaira" \

   113             ,"WalkerBranch" \

   114             ,"WillowCreek" \

   115             ,"WindRiver" \

   116             ,"Wisconsin_ihw" \

   117             ,"Wisconsin_irp" \

   118             ,"Wisconsin_mrp" \

   119             ,"Wisconsin_myjp" \

   120             ,"Wisconsin_pb" \

   121             ,"Wisconsin_rpcc" \

   122             ,"Wisconsin_yhw" \

   123             ,"Wisconsin_yjp" \

   124             ,"Wisconsin_yrp" \

   125             /)

   126 

   127  year_ob = (/"2003-2006" \

   128             ,"2005-2006" \

   129             ,"2005-2006" \

   130             ,"1999-2006" \

   131             ,"2002-2006" \

   132             ,"2000-2005" \

   133             ,"2004-2005" \

   134             ,"1996-2006" \

   135             ,"2004-2006" \

   136             ,"1999-2004" \

   137             ,"2003-2005" \

   138             ,"2001-2005" \

   139             ,"2001-2005" \

   140             ,"2005-2006" \

   141             ,"2004-2006" \

   142             ,"2005-2006" \

   143             ,"2005-2006" \

   144             ,"2005-2006" \

   145             ,"2000-2006" \

   146             ,"2004-2006" \

   147             ,"2002-2006" \

   148             ,"1991-2004" \

   149             ,"2004-2004" \

   150             ,"1996-2004" \

   151             ,"1999-2004" \

   152             ,"2003-2006" \

   153             ,"2004-2006" \

   154             ,"2002-2002" \

   155             ,"2000-2006" \

   156             ,"2002-2005" \

   157             ,"2001-2005" \

   158             ,"2001-2005" \

   159             ,"2001-2005" \

   160             ,"2001-2005" \

   161             ,"2004-2005" \

   162             ,"2004-2005" \

   163             ,"2003-2005" \

   164             ,"1996-2000" \

   165             ,"2004-2006" \

   166             ,"1998-2004" \

   167             ,"1999-2005" \

   168             ,"1999-2003" \

   169             ,"2005-2006" \

   170             ,"2005-2006" \

   171             ,"1996-2003" \

   172             ,"1998-1998" \

   173             ,"2004-2006" \

   174             ,"1997-2006" \

   175             ,"2004-2006" \

   176             ,"1997-2006" \

   177             ,"2002-2006" \

   178             ,"2004-2005" \

   179             ,"2001-2006" \

   180             ,"2004-2005" \

   181             ,"2001-2005" \

   182             ,"2001-2005" \

   183             ,"2002-2004" \

   184             ,"2001-2005" \

   185             ,"2001-2005" \

   186             ,"2002-2005" \

   187             ,"1999-2003" \

   188             ,"2001-2006" \

   189             ,"1995-1999" \

   190             ,"1999-2005" \

   191             ,"1999-2004" \

   192             ,"2003-2003" \

   193             ,"2003-2003" \

   194             ,"2002-2005" \

   195             ,"2004-2004" \

   196             ,"2002-2002" \

   197             ,"2005-2005" \

   198             ,"2002-2002" \

   199             ,"2004-2005" \

   200             ,"2002-2002" \

   201             /)

   202 

   203  field   = (/"NEE Flux" \

   204             ,"Net Radiation" \

   205             ,"Latent Heat" \

   206             ,"Sensible Heat" \

   207             ,"GPP Flux" \

   208             ,"Respiration" \

   209             /)

   210 

   211  field_unit = (/"u mol/m2/s" \

   212                ,"W/m2" \

   213                ,"W/m2" \

   214                ,"W/m2" \

   215                ,"u mol/m2/s" \

   216                ,"u mol/m2/s" \

   217                /)

   218 

   219  nstation = dimsizes(station)

   220  nfield   = dimsizes(field)

   221 

   222 ;========================================================================

   223 ; get observed info: number of year, first/last year, lat, lon

   224 ; and annual data

   225 

   226  dir_root = "/fis/cgd/cseg/people/jeff/clamp_data/observed/ameriflux/"

   227 

   228  year_station = new ((/nstation/),integer) ; number of year

   229  year_ob_i    = new ((/nstation/),integer) ; first year

   230  year_ob_f    = new ((/nstation/),integer) ; last year

   231  lat_ob       = new ((/nstation/),float)   ; latitude

   232  lon_ob       = new ((/nstation/),float)   ; longitude 

   233 

   234  data_ob_ann  = new ((/nfield, nmonth, nstation/),float)

   235 

   236  do n = 0, nstation-1

   237 

   238     diro = dir_root + station(n)+"/"

   239     filo = year_ob(n)+"_L4_m.nc"

   240     fo   = addfile (diro+filo,"r")

   241  

   242     lat_ob(n) = fo->lat

   243     lon_ob(n) = fo->lon

   244 

   245     year      = fo->year

   246 

   247     year_station(n) = dimsizes(year)

   248     year_ob_i(n)    = year(0)

   249     year_ob_f(n)    = year(year_station(n)-1)

   250  

   251     delete (year)

   252  

   253     data = fo->NEE_or_fMDS

   254     data_ob_ann(0,:,n) = dim_avg(data(month|:,year|:))

   255 

   256     data = fo->Rg_f

   257     data_ob_ann(1,:,n) = dim_avg(data(month|:,year|:))

   258 

   259     data = fo->LE_f

   260     data_ob_ann(2,:,n) = dim_avg(data(month|:,year|:))

   261 

   262     data = fo->H_f

   263     data_ob_ann(3,:,n) = dim_avg(data(month|:,year|:))

   264 

   265     data = fo->GPP_or_MDS

   266     data_ob_ann(4,:,n) = dim_avg(data(month|:,year|:))

   267 

   268     data = fo->Reco_or

   269     data_ob_ann(5,:,n) = dim_avg(data(month|:,year|:))

   270 

   271     delete (data) 

   272     delete (fo)   

   273  end do

   274 

   275 ;print (year_ob_i)

   276 ;print (year_ob_f)

   277 

   278 ;--------------------------------------------------------------

   279 ; find (# of year observed) >=4 and year_ob_i <= 2001

   280 

   281  i_long_ob = ind(year_station .ge. 4 .and. year_ob_i .le. 2001)

   282  

   283  station_long      = station(i_long_ob)

   284  lat_ob_long       = lat_ob(i_long_ob)

   285  lon_ob_long       = lat_ob(i_long_ob)

   286  year_ob_long      = year_ob(i_long_ob)

   287  year_ob_i_long    = year_ob_i(i_long_ob)

   288  year_ob_f_long    = year_ob_f(i_long_ob)

   289  year_station_long = year_station(i_long_ob)

   290 

   291  nstation_long     = dimsizes(station_long)

   292 

   293 ; print (i_long_ob)

   294 ; print (nstation_long)

   295 ; print (station_long)

   296 ; print (year_ob_i(i_long_ob))

   297 

   298 ;=========================================================

   299 ;   get model data at observed lat-lon

   300 

   301     dirm = "/fis/cgd/cseg/people/jeff/clamp_data/model/"    

   302     film = model_name+"_ameriflux_1990-2004_monthly.nc"

   303     fm   = addfile (dirm+film,"r")

   304 

   305     xm   = fm->lon

   306     ym   = fm->lat 

   307     date = fm->date

   308 

   309     date_dim = dimsizes(date)

   310     nyear  = date_dim(0)

   311 

   312     data_mod      = new ((/nfield,nyear,nmonth,nstation/),float)

   313     data_mod_ann  = new ((/nfield,nmonth,nstation/),float)

   314     data_mod_long = new ((/nfield,nyear,nmonth,nstation_long/),float)

   315 

   316 ;   change to unit of observed (u mol/m2/s)

   317 ;   Model_units [=] gC/m2/s

   318 ;   12. = molecular weight of C

   319 ;   u mol = 1e-6 mol

   320 

   321     factor = 1.e6 /12.

   322 

   323 ;------------------------------------------------------------

   324 ;   interpolate model data into observed station

   325 ;   note: model is 0-360E, 90S-90N

   326 

   327 ;   to be able to handle observation at (-89.98,-24.80)

   328     ym(0) = -90.

   329 ;------------------------------------------------------------  

   330 

   331 if (ENERGY .eq. "old") then

   332 

   333   data = fm->NEE

   334   data_mod(0,:,:,:) = data(:,:,:) * factor

   335 

   336 ; data  = fm->LATENT

   337   data1 = fm->FCEV

   338   data2 = fm->FCTR

   339   data3 = fm->FGEV

   340   data_mod(2,:,:,:) = data1(:,:,:)+data2(:,:,:)+data3(:,:,:) 

   341   delete (data1)

   342   delete (data2)

   343   delete (data3)

   344 

   345 ; data = fm->SENSIBLE

   346   data  = fm->FSH

   347   data_mod(3,:,:,:) = data(:,:,:) 

   348 

   349 ; data  = fm->NETRAD

   350   data1 = fm->FSA

   351   data2 = fm->FIRA

   352   data_mod(1,:,:,:) = data1(:,:,:)-data2(:,:,:) 

   353   delete (data1)

   354   delete (data2)

   355 

   356 else

   357 

   358   data = fm->NEE

   359   yy = linint2_points_Wrap(xm,ym,data,True,lon_ob,lat_ob,0)

   360   data_mod_ann(0,:,:)= dim_avg(yy(month|:,pts|:,year|:)) * factor

   361   data_mod(0,:,:,:) = yy(:,:,:) * factor

   362 

   363 ; printVarSummary(yy)

   364 

   365   data = fm->NETRAD

   366   yy = linint2_points_Wrap(xm,ym,data,True,lon_ob,lat_ob,0)

   367   data_mod_ann(1,:,:)= dim_avg(yy(month|:,pts|:,year|:)) 

   368   data_mod(1,:,:,:) = yy(:,:,:) 

   369 

   370   data = fm->LATENT

   371   yy = linint2_points_Wrap(xm,ym,data,True,lon_ob,lat_ob,0)

   372   data_mod_ann(2,:,:)= dim_avg(yy(month|:,pts|:,year|:)) 

   373   data_mod(2,:,:,:) = yy(:,:,:) 

   374 

   375 ; data = fm->SENSIBLE

   376   data = fm->FSH

   377   yy = linint2_points_Wrap(xm,ym,data,True,lon_ob,lat_ob,0)

   378   data_mod_ann(3,:,:)= dim_avg(yy(month|:,pts|:,year|:)) 

   379   data_mod(3,:,:,:) = yy(:,:,:) 

   380 

   381 end if

   382 

   383   data = fm->GPP

   384   yy = linint2_points_Wrap(xm,ym,data,True,lon_ob,lat_ob,0)

   385   data_mod_ann(4,:,:)= dim_avg(yy(month|:,pts|:,year|:)) * factor

   386   data_mod(4,:,:,:) = yy(:,:,:) * factor 

   387 

   388   if (model .eq. "cn") then

   389      data = fm->ER

   390   else

   391      data1 = fm->AR

   392      data2 = fm->HR

   393      data  = data1 + data2

   394     

   395      delete (data1)

   396      delete (data2)

   397   end if

   398 

   399   yy = linint2_points_Wrap(xm,ym,data,True,lon_ob,lat_ob,0)

   400   data_mod_ann(5,:,:)= dim_avg(yy(month|:,pts|:,year|:)) * factor

   401   data_mod(5,:,:,:) = yy(:,:,:) * factor

   402 

   403   data_mod_long(:,:,:,:) = data_mod(:,:,:,i_long_ob)

   404 

   405   delete (data_mod)

   406   delete (fm) 

   407   delete (data)

   408   delete (yy)

   409 

   410 ;*******************************************************************

   411 ; for station line plot

   412 ;*******************************************************************

   413 

   414 ; for x-axis in xyplot

   415   mon = ispan(1,12,1)

   416   mon@long_name = "month"

   417 

   418   res                   = True               ; plot mods desired

   419   res@xyLineThicknesses = (/2.0,2.0/)        ; make 2nd lines thicker

   420   res@xyLineColors      = (/"blue","red"/)   ; line color (ob,model)

   421 

   422   res@tmXBFormat  = "f"                      ; not to add trailing zeros

   423 

   424 ;-------------------------------------------------------------------------

   425 ; Add a boxed legend using the more simple method

   426 

   427   res@pmLegendDisplayMode    = "Always"

   428 ; res@pmLegendWidthF         = 0.1

   429   res@pmLegendWidthF         = 0.08

   430   res@pmLegendHeightF        = 0.06

   431 ; res@pmLegendOrthogonalPosF = -1.17

   432 ; res@pmLegendOrthogonalPosF = -1.00  ;(downward)

   433   res@pmLegendOrthogonalPosF = -0.30  ;(downward)

   434 

   435 ; res@pmLegendParallelPosF   =  0.18

   436   res@pmLegendParallelPosF   =  0.23  ;(rightward)

   437 

   438 ; res@lgPerimOn             = False

   439   res@lgLabelFontHeightF     = 0.015

   440   res@xyExplicitLegendLabels = (/"observed",model_name/)

   441 ;-------------------------------------------------------------------

   442 ; for panel plot

   443   res@gsnFrame     = False                   ; Do not draw plot 

   444   res@gsnDraw      = False                   ; Do not advance frame

   445 

   446   pres                            = True     ; panel plot mods desired

   447   pres@gsnPanelYWhiteSpacePercent = 5        ; increase white space around

   448                                              ; indiv. plots in panel

   449   pres@gsnMaximize                = True     ; fill the page

   450 ;-------------------------------------------------------------------

   451 

   452 ;==============================================================

   453 ; get ob data at each site with long observation

   454 

   455   dir_root = "/fis/cgd/cseg/people/jeff/clamp/ameriflux/data/"

   456 

   457   do n = 0,nstation_long-1

   458 ; do n = 0,0

   459 

   460     year_setback = 0

   461 

   462     nyear = year_station_long(n)

   463 

   464     if (year_ob_f_long(n).eq. 2006) then

   465        year_setback = 2006 -2004

   466     end if

   467     if (year_ob_f_long(n).eq. 2005) then

   468        year_setback = 2005 -2004

   469     end if

   470     

   471     ntime = (nyear - year_setback) * nmonth

   472 

   473     data_ob   = new ((/nfield, nyear, nmonth/),float)

   474 

   475     diro = dir_root + station_long(n)+"/"

   476     filo = year_ob_long(n)+"_L4_m.nc"

   477     fo   = addfile (diro+filo,"r")

   478 

   479 ;   print (diro)

   480 ;   print (filo)

   481 

   482     data_ob(0,:,:) = fo->NEE_or_fMDS

   483     data_ob(1,:,:) = fo->Rg_f

   484     data_ob(2,:,:) = fo->LE_f

   485     data_ob(3,:,:) = fo->H_f

   486     data_ob(4,:,:) = fo->GPP_or_MDS

   487     data_ob(5,:,:) = fo->Reco_or

   488 

   489     delete (fo)

   490 

   491     timeI = new((/ntime/),integer)

   492     timeF = new((/ntime/),float)

   493     timeI = ispan(1,ntime,1)

   494     timeF = year_ob_i_long(n) + (timeI-1)/12.

   495     timeF@long_name = "year" 

   496 

   497     plot_data = new((/2,ntime/),float)

   498  

   499 ;----------------------------

   500 ; for model_vs_ob

   501 

   502     plot_name = station_long(n)+"_tseries_vs_ob"

   503     title = station_long(n)+"("+sprintf("%5.2f",lat_ob_long(n))+","+sprintf("%5.2f",lon_ob_long(n))+")"    

   504     res@tiMainString = title

   505 

   506     wks = gsn_open_wks (plot_type,plot_name)

   507     plot=new(nfield,graphic)                         ; create graphic array   

   508 

   509     i_year_mod_i = year_ob_i_long(n) - 1990 

   510     i_year_mod_f = i_year_mod_i + nyear - 1 - year_setback

   511 

   512     i_year_ob_f =  nyear - year_setback - 1 

   513 

   514 ;   print (nyear)

   515 ;   print (i_year_ob_f)

   516 ;   print (i_year_mod_i)

   517 ;   print (i_year_mod_f)

   518 

   519     do i = 0,nfield-1                           

   520        plot_data(0,:) = ndtooned(data_ob (i,0:i_year_ob_f,:))

   521        plot_data(1,:) = ndtooned(data_mod_long(i,i_year_mod_i:i_year_mod_f,:,n))

   522        plot_data@long_name = field(i)+" ("+field_unit(i)+")"   

   523        plot(i)=gsn_csm_xy(wks,timeF,plot_data,res)            ; create plot 

   524     end do

   525    

   526     gsn_panel(wks,plot,(/3,2/),pres)                    ; create panel plot

   527 

   528     system("convert "+plot_name+"."+plot_type+" "+plot_name+"."+plot_type_new+";"+ \

   529            "rm "+plot_name+"."+plot_type)

   530 

   531     clear (wks)  

   532     delete (plot)

   533 

   534     delete (data_ob)

   535     delete (timeI)    

   536     delete (timeF)

   537     delete (plot_data)

   538 

   539  end do

   540 

   541 ;###################################################################

   542 ; for the following tables,

   543 ; sort by latitude in decending order (N->S)

   544 

   545   isort = dim_pqsort(lat_ob_long,-1)

   546 

   547   station_sort = station_long(isort)

   548   year_ob_sort = year_ob_long(isort)

   549   lat_ob_sort  = lat_ob_long(isort)

   550   lon_ob_sort  = lon_ob_long(isort)

   551  

   552 ; print(isort)

   553 ; print(lat_ob_sort)

   554 

   555 ;*******************************************************************

   556 ; html table of site: observed

   557 ;*******************************************************************

   558   output_html = "tseries_vs_ob.html"

   559 

   560   header = (/"<HTML>" \

   561             ,"<HEAD>" \

   562             ,"<TITLE>CLAMP metrics</TITLE>" \

   563             ,"</HEAD>" \

   564             ,"<H1>Timeseries at Site: "+model_name+" vs Observation</H1>" \

   565             /) 

   566   footer = "</HTML>"

   567 

   568   table_header = (/ \

   569         "<table border=1 cellspacing=0 cellpadding=3 width=60%>" \

   570        ,"<tr>" \

   571        ,"   <th bgcolor=DDDDDD >Site Name</th>" \

   572        ,"   <th bgcolor=DDDDDD >Latitude</th>" \

   573        ,"   <th bgcolor=DDDDDD >Longitude</th>" \

   574        ,"   <th bgcolor=DDDDDD >Observed</th>" \ 

   575        ,"</tr>" \

   576        /)

   577   table_footer = "</table>"

   578   row_header = "<tr>"

   579   row_footer = "</tr>"

   580 

   581   lines = new(50000,string)

   582   nline = 0

   583 

   584   set_line(lines,nline,header)

   585   set_line(lines,nline,table_header)

   586 ;-----------------------------------------------

   587 ; row of table

   588   

   589   do n = 0,nstation_long-1

   590 

   591      set_line(lines,nline,row_header)

   592 

   593      txt0 = station_sort(n)

   594      txt1 = sprintf("%5.2f", lat_ob_sort(n))

   595      txt2 = sprintf("%5.2f", lon_ob_sort(n))

   596      txt3 = year_ob_sort(n)

   597 

   598      set_line(lines,nline,"<th><a href="+txt0+"_tseries_vs_ob.png>"+txt0+"</a></th>")

   599      set_line(lines,nline,"<th>"+txt1+"</th>")

   600      set_line(lines,nline,"<th>"+txt2+"</th>")

   601      set_line(lines,nline,"<th>"+txt3+"</th>")

   602 

   603      set_line(lines,nline,row_footer)

   604   end do

   605 ;-----------------------------------------------

   606   set_line(lines,nline,table_footer)

   607   set_line(lines,nline,footer) 

   608 

   609 ; Now write to an HTML file.

   610   idx = ind(.not.ismissing(lines))

   611   if(.not.any(ismissing(idx))) then

   612     asciiwrite(output_html,lines(idx))

   613   else

   614    print ("error?")

   615   end if

   616   delete (idx)

   617 

   618   delete (isort)

   619   delete (station_sort)

   620   delete (year_ob_sort)

   621   delete (lat_ob_sort)

   622   delete (lon_ob_sort)

   623 

   624 ;************************************************************

   625 ; compute annual cycle correlation coef and M score

   626 ;************************************************************

   627 

   628  score_max = 5.

   629 

   630  ccr     = new ((/nstation, nfield/),float)

   631  M_score = new ((/nstation, nfield/),float) 

   632 

   633  do n=0,nstation-1

   634  do m=0,nfield-1   

   635     ccr(n,m) = esccr(data_ob_ann(m,:,n),data_mod_ann(m,:,n),0)

   636     bias = sum(abs(data_mod_ann(m,:,n)-data_ob_ann(m,:,n))/(abs(data_mod_ann(m,:,n))+abs(data_ob_ann(m,:,n))))

   637     M_score(n,m) = (1. -(bias/nmonth)) * score_max

   638  end do

   639  end do

   640 

   641  M_co2 = avg(M_score(:,0))

   642  M_rad = avg(M_score(:,1))

   643  M_lh  = avg(M_score(:,2))

   644  M_sh  = avg(M_score(:,3))

   645  M_gpp = avg(M_score(:,4))

   646  M_er  = avg(M_score(:,5))

   647  M_all = M_co2+ M_rad +M_lh + M_sh + M_gpp + M_er

   648 

   649  M_energy_co2 = sprintf("%.2f", M_co2)

   650  M_energy_rad = sprintf("%.2f", M_rad)

   651  M_energy_lh  = sprintf("%.2f", M_lh )

   652  M_energy_sh  = sprintf("%.2f", M_sh )

   653  M_energy_gpp = sprintf("%.2f", M_gpp)

   654  M_energy_er  = sprintf("%.2f", M_er )

   655  M_energy_all = sprintf("%.2f", M_all)

   656 

   657 ;*******************************************************************

   658 ; for station line plot

   659 ;*******************************************************************

   660 

   661 ; for x-axis in xyplot

   662   mon = ispan(1,12,1)

   663   mon@long_name = "month"

   664 

   665 ;-------------------------------------------------------------------

   666 

   667   plot_data   = new((/2,nmonth/),float)

   668   plot_data!0 = "case"

   669   plot_data!1 = "month"

   670 

   671   do n = 0,nstation-1

   672 ;----------------------------

   673 ; for observed

   674 

   675     plot_name = station(n)+"_ob"    

   676     title = station(n)+"("+sprintf("%5.2f",lat_ob(n))+","+sprintf("%5.2f",lon_ob(n))+")"

   677     res@tiMainString = title

   678 

   679     wks = gsn_open_wks (plot_type,plot_name)

   680     plot=new(nfield,graphic)                        ; create graphic array   

   681 

   682     do i = 0,nfield-1                           

   683        plot_data(0,:) = (/data_ob_ann(i,:,n)/)

   684        plot_data@long_name = field(i)+" ("+field_unit(i)+")"   

   685        plot(i)=gsn_csm_xy(wks,mon,plot_data(0,:),res)    ; create plot 

   686     end do

   687 

   688     gsn_panel(wks,plot,(/3,2/),pres)                 ; create panel plot

   689 

   690     system("convert "+plot_name+"."+plot_type+" "+plot_name+"."+plot_type_new+";"+ \

   691            "rm "+plot_name+"."+plot_type)

   692 

   693     clear (wks)  

   694     delete (plot)

   695 ;----------------------------

   696 ; for model_vs_ob

   697 

   698     plot_name = station(n)+"_model_vs_ob"

   699     title = station(n)+"("+sprintf("%5.2f",lat_ob(n))+","+sprintf("%5.2f",lon_ob(n))+")"    

   700     res@tiMainString = title

   701 

   702     wks = gsn_open_wks (plot_type,plot_name)

   703     plot=new(nfield,graphic)                         ; create graphic array   

   704 

   705     do i = 0,nfield-1                           

   706        plot_data(0,:) = (/data_ob_ann(i,:,n)/)

   707        plot_data(1,:) = (/data_mod_ann(i,:,n)/)

   708        plot_data@long_name = field(i)+" ("+field_unit(i)+")"   

   709        plot(i)=gsn_csm_xy(wks,mon,plot_data,res)     ; create plot 

   710     end do

   711    

   712     gsn_panel(wks,plot,(/3,2/),pres)                 ; create panel plot

   713 

   714     system("convert "+plot_name+"."+plot_type+" "+plot_name+"."+plot_type_new+";"+ \

   715            "rm "+plot_name+"."+plot_type)

   716 

   717     clear (wks)  

   718     delete (plot)

   719  end do

   720 

   721 ;###################################################################

   722 ; for the following tables,

   723 ; sort by latitude in decending order (N->S)

   724 ; sort by lat in decending order (N->S)

   725 

   726   isort = dim_pqsort(lat_ob,-1)

   727 

   728   station_sort = station(isort)

   729   year_ob_sort = year_ob(isort)

   730   lat_ob_sort  = lat_ob(isort)

   731   lon_ob_sort  = lon_ob(isort)

   732   M_score_sort = M_score(isort,:)

   733  

   734 ; print(isort)

   735 ; print(lat_ob_sort)

   736 ;###################################################################

   737 ;*******************************************************************

   738 ; html table of site: observed

   739 ;*******************************************************************

   740   output_html = "line_ob.html"

   741 

   742   header = (/"<HTML>" \

   743             ,"<HEAD>" \

   744             ,"<TITLE>CLAMP metrics</TITLE>" \

   745             ,"</HEAD>" \

   746             ,"<H1>Energy at Site: Observation</H1>" \

   747             /) 

   748   footer = "</HTML>"

   749 

   750   table_header = (/ \

   751         "<table border=1 cellspacing=0 cellpadding=3 width=60%>" \

   752        ,"<tr>" \

   753        ,"   <th bgcolor=DDDDDD >Site Name</th>" \

   754        ,"   <th bgcolor=DDDDDD >Latitude</th>" \

   755        ,"   <th bgcolor=DDDDDD >Longitude</th>" \

   756        ,"   <th bgcolor=DDDDDD >Observed</th>" \ 

   757        ,"</tr>" \

   758        /)

   759   table_footer = "</table>"

   760   row_header = "<tr>"

   761   row_footer = "</tr>"

   762 

   763   lines = new(50000,string)

   764   nline = 0

   765 

   766   set_line(lines,nline,header)

   767   set_line(lines,nline,table_header)

   768 ;-----------------------------------------------

   769 ; row of table

   770   

   771   do n = 0,nstation-1

   772      set_line(lines,nline,row_header)

   773 

   774      txt0 = station_sort(n)

   775      txt1 = sprintf("%5.2f", lat_ob_sort(n))

   776      txt2 = sprintf("%5.2f", lon_ob_sort(n))

   777      txt3 = year_ob_sort(n)

   778 

   779      set_line(lines,nline,"<th><a href="+txt0+"_ob.png>"+txt0+"</a></th>")

   780      set_line(lines,nline,"<th>"+txt1+"</th>")

   781      set_line(lines,nline,"<th>"+txt2+"</th>")

   782      set_line(lines,nline,"<th>"+txt3+"</th>")

   783 

   784      set_line(lines,nline,row_footer)

   785   end do

   786 ;-----------------------------------------------

   787   set_line(lines,nline,table_footer)

   788   set_line(lines,nline,footer) 

   789 

   790 ; Now write to an HTML file.

   791   idx = ind(.not.ismissing(lines))

   792   if(.not.any(ismissing(idx))) then

   793     asciiwrite(output_html,lines(idx))

   794   else

   795    print ("error?")

   796   end if

   797   delete (idx)

   798 

   799 ;*******************************************************************

   800 ; score and line table : model vs observed

   801 ;*******************************************************************

   802   output_html = "score+line_vs_ob.html"

   803 

   804   header = (/"<HTML>" \

   805             ,"<HEAD>" \

   806             ,"<TITLE>CLAMP metrics</TITLE>" \

   807             ,"</HEAD>" \

   808             ,"<H1>Energy at Site: Model "+model_name+"</H1>" \

   809             /) 

   810   footer = "</HTML>"

   811 

   812   delete (table_header)

   813   table_header = (/ \

   814         "<table border=1 cellspacing=0 cellpadding=3 width=100%>" \

   815        ,"<tr>" \

   816        ,"   <th bgcolor=DDDDDD >Site Name</th>" \

   817        ,"   <th bgcolor=DDDDDD >Latitude</th>" \

   818        ,"   <th bgcolor=DDDDDD >Longitude</th>" \

   819        ,"   <th bgcolor=DDDDDD >Observed</th>" \

   820        ,"   <th bgcolor=DDDDDD >CO2 Flux</th>" \

   821        ,"   <th bgcolor=DDDDDD >Net Radiation</th>" \

   822        ,"   <th bgcolor=DDDDDD >Latent Heat</th>" \

   823        ,"   <th bgcolor=DDDDDD >Sensible Heat</th>" \

   824        ,"   <th bgcolor=DDDDDD >GPP Glux</th>" \

   825        ,"   <th bgcolor=DDDDDD >Respiration</th>" \

   826        ,"   <th bgcolor=DDDDDD >Average</th>" \

   827        ,"</tr>" \

   828        /)

   829   table_footer = "</table>"

   830   row_header = "<tr>"

   831   row_footer = "</tr>"

   832 

   833   lines = new(50000,string)

   834   nline = 0

   835 

   836   set_line(lines,nline,header)

   837   set_line(lines,nline,table_header)

   838 ;-----------------------------------------------

   839 ; row of table

   840   

   841   do n = 0,nstation-1

   842      set_line(lines,nline,row_header)

   843 

   844      txt0  = station_sort(n)

   845      txt1  = sprintf("%5.2f", lat_ob_sort(n))

   846      txt2  = sprintf("%5.2f", lon_ob_sort(n))

   847      txt3  = year_ob_sort(n)

   848      txt4  = sprintf("%5.2f", M_score_sort(n,0))

   849      txt5  = sprintf("%5.2f", M_score_sort(n,1))

   850      txt6  = sprintf("%5.2f", M_score_sort(n,2))

   851      txt7  = sprintf("%5.2f", M_score_sort(n,3))

   852      txt8  = sprintf("%5.2f", M_score_sort(n,4))

   853      txt9  = sprintf("%5.2f", M_score_sort(n,5))

   854      txt10 = sprintf("%5.2f", avg(M_score_sort(n,:)))

   855 

   856      set_line(lines,nline,"<th><a href="+txt0+"_model_vs_ob.png>"+txt0+"</a></th>")

   857      set_line(lines,nline,"<th>"+txt1+"</th>")

   858      set_line(lines,nline,"<th>"+txt2+"</th>")

   859      set_line(lines,nline,"<th>"+txt3+"</th>")

   860      set_line(lines,nline,"<th>"+txt4+"</th>")

   861      set_line(lines,nline,"<th>"+txt5+"</th>")

   862      set_line(lines,nline,"<th>"+txt6+"</th>")

   863      set_line(lines,nline,"<th>"+txt7+"</th>")

   864      set_line(lines,nline,"<th>"+txt8+"</th>")

   865      set_line(lines,nline,"<th>"+txt9+"</th>")

   866      set_line(lines,nline,"<th>"+txt10+"</th>")

   867 

   868      set_line(lines,nline,row_footer)

   869   end do

   870 

   871 ; last row, summary

   872   set_line(lines,nline,row_header)

   873 

   874   txt0  = "All_"+sprintf("%.0f", nstation)

   875   txt1  = "-"

   876   txt2  = "-"

   877   txt3  = "-"

   878   txt4  = M_energy_co2

   879   txt5  = M_energy_rad

   880   txt6  = M_energy_lh

   881   txt7  = M_energy_sh

   882   txt8  = M_energy_gpp

   883   txt9  = M_energy_er

   884   txt10 = M_energy_all

   885 

   886   set_line(lines,nline,"<th>"+txt0+"</th>")

   887   set_line(lines,nline,"<th>"+txt1+"</th>")

   888   set_line(lines,nline,"<th>"+txt2+"</th>")

   889   set_line(lines,nline,"<th>"+txt3+"</th>")

   890   set_line(lines,nline,"<th>"+txt4+"</th>")

   891   set_line(lines,nline,"<th>"+txt5+"</th>")

   892   set_line(lines,nline,"<th>"+txt6+"</th>")

   893   set_line(lines,nline,"<th>"+txt7+"</th>")

   894   set_line(lines,nline,"<th>"+txt8+"</th>")

   895   set_line(lines,nline,"<th>"+txt9+"</th>")

   896   set_line(lines,nline,"<th>"+txt10+"</th>")

   897 

   898   set_line(lines,nline,row_footer)

   899 ;-----------------------------------------------

   900   set_line(lines,nline,table_footer)

   901   set_line(lines,nline,footer) 

   902 

   903 ; Now write to an HTML file.

   904   idx = ind(.not.ismissing(lines))

   905   if(.not.any(ismissing(idx))) then

   906     asciiwrite(output_html,lines(idx))

   907   else

   908    print ("error?")

   909   end if

   910   delete (idx)

   911 

   912 ;***************************************************************************

   913 ; output plots

   914 ;***************************************************************************

   915   output_dir = model_name+"/ameriflux"

   916 

   917   system("mv *.png *.html " + output_dir) 

   918 ;***************************************************************************

   919 end

   920
clamp